Miyakogusa Predicted Gene
- Lj0g3v0086049.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|TC72811 |
79.8 |
84.5 |
84.5 |
similar to UniRef100_A2Q516 Cluster: SAM (And some other nucleotide) binding motif; n=1; Medicago truncatula|Rep: SAM (And some other nucleotide) binding motif - Medicago truncatula (Barrel medic), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0086049.1 |
length: 57 aa. |
| IPR014816 |
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit GCD14 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016429 |
tRNA (adenine-N1-)-methyltransferase activity |
|
|
| Biological Process |
GO:0030488 |
tRNA methylation |
|
|
| Cellular Component |
GO:0031515 |
tRNA (m1A) methyltransferase complex |
|
|
| HMMPfam |
PF08704 |
GCD14 |
0.00015 |
3-25 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
| 32 |
53 |
- Wolf-PSORT
Lj0g3v0086049.1 extr 5, cyto 4, vacu 2, cyto_pero 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0086049.1 |
|