Miyakogusa Predicted Gene

Lj0g3v0084489.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KVX1_SOYBN 1013 76.9 86.5 (tr|K7KVX1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G47780.1 828 64.6 78.4 | Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:17624500-17628972 FORWARD LENGTH=935
Medicago Medtr4g108153.1 1004 77.7 86.1 | ABC transporter A family protein | HC | chr4:44832885-44841828 | 20130731
Soybean Glyma04g34130.1 990 76.4 85.3  
LJGI gnl|LJGI|TC63647 385 99.5 99.5 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_101, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0084489.2 length: 652 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.7e-11 511-626
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 605-619
IPR026082 ABC transporter A, ABCA
HMMPanther PTHR19229 ATP-BINDING 9.2e-286 1-627
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.1e-31 465-628
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1e-36 462-627
HMMPanther PTHR19229:SF7 ABC 9.2e-286 1-627
HMMPfam PF12698 ABC2_membrane_3 1.8e-14 101-397
Seg seg seg NA 627-643
Putative transmembrane regions
  From To
TM segments
SOSUI		 149 171
186 208
240 262
272 294
300 322
377 399
Wolf-PSORT
Lj0g3v0084489.2	plas 6, nucl 5, chlo 1, cyto 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0084489.2