Miyakogusa Predicted Gene

Lj0g3v0084459.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J833_MEDTR 1191 87.6 92.1 (tr|G7J833) Transmembrane 9 superfamily protein member OS=Medicago truncatula GN=MTR_3g082140 PE=4 SV=1
TAIR_pep AT4G12650.1 1059 80.0 87.4 | Symbols: | Endomembrane protein 70 protein family | chr4:7468207-7470165 REVERSE LENGTH=652
Medicago Medtr3g082140.1 1191 87.6 92.1 | transmembrane 9 family protein | HC | chr3:37068525-37072769 | 20130731
Soybean Glyma20g14250.1 1167 86.7 91.7  
LJGI gnl|LJGI|GO023858 1493 99.9 99.9 similar to UniRef100_A7Q2V0 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0084459.1 length: 659 aa.
IPR004240 Nonaspanin (TM9SF)
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR10766 TRANSMEMBRANE 0 5-659
HMMPfam PF02990 EMP70 4.4e-184 59-611
no_ID  
Coil coil coiled-coil NA 315-336
HMMPanther PTHR10766:SF1 TRANSMEMBRANE 0 5-659
Seg seg seg NA 184-203
553-561
Putative transmembrane regions
  From To
TM segments
SOSUI		 9 31
293 315
361 383
392 414
431 453
464 486
518 540
552 574
587 609
625 647
Wolf-PSORT
Lj0g3v0084459.1	plas 12, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0084459.1