Miyakogusa Predicted Gene

Lj0g3v0083969.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JXS2_MEDTR 337 88.1 95.1 (tr|G7JXS2) Protein TRANSPARENT TESTA OS=Medicago truncatula GN=MTR_5g032720 PE=4 SV=1
TAIR_pep AT5G65380.1 280 73.9 85.3 | Symbols: | MATE efflux family protein | chr5:26123241-26126352 REVERSE LENGTH=486
Medicago Medtr5g032720.1 337 88.1 95.1 | MATE efflux family protein | HC | chr5:14091048-14096664 | 20130731
Soybean Glyma01g03090.1 335 87.7 93.0  
LJGI gnl|LJGI|TC73360 1088 99.5 99.5 similar to UniRef100_A7R0I1 Cluster: Chromosome undetermined scaffold_309, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_309, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0083969.1 length: 187 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 7.4e-30 2-128
no_ID  
HMMPanther PTHR11206 MULTIDRUG 7.1e-95 1-186
HMMPanther PTHR11206:SF21 MATE 7.1e-95 1-186
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
38 60
80 102
111 133
141 162
Wolf-PSORT
Lj0g3v0083969.1	vacu 12, plas 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0083969.1