Miyakogusa Predicted Gene

Lj0g3v0083289.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NB85_SOYBN 884 79.9 86.4 (tr|I1NB85) Pectinesterase OS=Glycine max PE=3 SV=2
TAIR_pep AT4G02330.1 658 61.2 73.1 | Symbols: ATPMEPCRB | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:1032479-1034928 FORWARD LENGTH=573
Medicago Medtr7g108890.1 859 78.0 86.7 | pectinesterase/pectinesterase inhibitor | HC | chr7:44477030-44473733 | 20130731
Soybean Glyma03g37410.1 881 79.0 87.5  
LJGI gnl|LJGI|TC60462 1356 99.9 99.9 weakly similar to UniRef100_A0ZNK1 Cluster: Pectin methylesterase 3; n=1; Pyrus communis|Rep: Pectin methylesterase 3 - Pyrus communis (Pear), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0083289.1 length: 564 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 5.7e-137 251-549
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 5.7e-19 36-183
HMMPfam PF04043 PMEI 1.5e-20 35-182
HMMSmart SM00856 Plant 2e-19 29-182
superfamily SSF101148 Plant 2.3e-18 35-187
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 2.5e-108 243-563
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.6e-120 248-561
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 397-406
no_ID  
HMMPanther PTHR31707 FAMILY 3.3e-252 21-564
HMMPanther PTHR31707:SF0 SUBFAMILY 3.3e-252 21-564
Seg seg seg NA 7-27
260-276
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 25
Wolf-PSORT
Lj0g3v0083289.1	vacu 4, chlo 3, extr 2, golg 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0083289.1