Miyakogusa Predicted Gene

Lj0g3v0083039.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M8Y1_SOYBN 485 77.7 80.9 (tr|I1M8Y1) KNOX-like DNA-binding protein OS=Glycine max PE=2 SV=1
TAIR_pep AT4G08150.1 378 62.6 72.9 | Symbols: KNAT1, BP, BP1 | KNOTTED-like from Arabidopsis thaliana | chr4:5147969-5150610 REVERSE LENGTH=398
Medicago Medtr1g017080.1 454 72.8 76.9 | homeobox knotted-like protein | HC | chr1:4656188-4662387 | 20130731
Soybean Glyma14g10430.1 485 77.7 80.9  
LJGI gnl|LJGI|TC76769 1754 98.9 98.9 homeobox knotted-1-like protein KNOX2;homeobox transcription factor; LjKN2
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0083039.1 length: 305 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 2.1e-13 208-273
ProfileScan PS50071 HOMEOBOX_2 12.989 206-269
IPR005539 ELK
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03789 ELK 1.5e-08 186-207
ProfileScan PS51213 ELK 10.999 186-206
IPR005540 KNOX1
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03790 KNOX1 6.3e-23 43-86
IPR005541 KNOX2
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03791 KNOX2 1.2e-25 95-145
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 3.4e-15 226-265
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.4e-26 211-272
superfamily SSF46689 Homeodomain-like 2.6e-19 207-284
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 244-267
no_ID  
HMMPanther PTHR11850 HOMEOBOX 3.4e-53 41-277
HMMPanther PTHR11850:SF15 HOMEOBOX 3.4e-53 41-277
Seg seg seg NA 29-40
88-96
191-217
Wolf-PSORT
Lj0g3v0083039.1	nucl 12.5, cyto_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0083039.1