Miyakogusa Predicted Gene

Lj0g3v0078539.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MFE4_SOYBN 983 75.7 83.5 (tr|K7MFE4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G19440.2 620 48.8 68.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:10602006-10604483 REVERSE LENGTH=825
Medicago Medtr8g071970.1 961 72.1 84.2 | PPR containing plant-like protein | HC | chr8:30370460-30375133 | 20130731
Soybean Glyma16g06320.1 956 76.7 84.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0078539.1 length: 644 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 3.2e-05 290-316
325-351
357-386
HMMPfam PF12854 PPR_1 9.3e-08 106-138
456-486
HMMPfam PF13041 PPR_2 2.4e-17 145-193
214-263
390-437
496-543
564-613
HMMTigr TIGR00756 PPR: 1.9e-10 112-145
147-181
182-216
217-251
252-285
360-390
392-426
427-461
462-495
497-531
533-566
567-600
602-636
ProfileScan PS51375 PPR 13.592 110-144
76-106
145-179
180-214
215-249
250-284
285-319
355-389
320-354
390-424
425-459
460-494
495-529
530-564
565-599
600-634
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.7e-07 397-630
no_ID  
HMMPanther PTHR24015 FAMILY 6.5e-169 20-642
HMMPanther PTHR24015:SF0 SUBFAMILY 6.5e-169 20-642
superfamily SSF48452 TPR-like 0.0014 425-522
565-639
superfamily SSF81901 HCP-like 0.0018 265-467
Wolf-PSORT
Lj0g3v0078539.1	chlo 7, nucl 2, cyto 2, extr 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0078539.1