Miyakogusa Predicted Gene
- Lj0g3v0075379.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LJ17_SOYBN |
340 |
84.0 |
89.2 |
(tr|I1LJ17) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G20990.3 |
310 |
75.3 |
84.5 |
| Symbols: SYTA | synaptotagmin A | chr2:9014827-9017829 FORWARD LENGTH=579 |
| Medicago |
Medtr4g073400.1 |
324 |
87.2 |
95.3 |
| calcium-dependent lipid-binding (CaLB domain) family protein | HC | chr4:27791390-27799317 | 20130731 |
| Soybean |
Glyma11g11470.1 |
340 |
84.0 |
89.2 |
|
| LJGI |
gnl|LJGI|FS333893 |
1061 |
99.6 |
99.6 |
similar to UniRef100_A7NSS8 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0075379.3 |
length: 194 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR10774 |
EXTENDED |
7.2e-82 |
1-194 |
| HMMPanther |
PTHR10774:SF2 |
C2 |
7.2e-82 |
1-194 |
| Seg |
seg |
seg |
NA |
7-22 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
7 |
29 |
- Wolf-PSORT
Lj0g3v0075379.3 nucl 5, extr 4, mito 2, cyto 1.5, mito_plas 1.5, cyto_E.R. 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0075379.3 |
|