Miyakogusa Predicted Gene
- Lj0g3v0068679.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JSC4_MEDTR |
95.5 |
57.0 |
78.5 |
(tr|G7JSC4) NBS resistance protein-like protein OS=Medicago truncatula GN=MTR_4g020700 PE=4 SV=1 |
| TAIR_pep |
AT5G17970.1 |
70.5 |
50.0 |
61.1 |
| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:5948999-5951619 REVERSE LENGTH=780 |
| Medicago |
Medtr7g088950.8 |
95.9 |
59.0 |
78.2 |
| disease resistance protein (TIR-NBS-LRR class) | LC | chr7:34737657-34722174 | 20130731 |
| Soybean |
Glyma01g27460.1 |
83.2 |
45.7 |
66.3 |
|
| LJGI |
gnl|LJGI|FS323379 |
468 |
100.0 |
100.0 |
similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago truncatula|Rep: TIR; AAA ATPase - Medicago truncatula (Barrel medic), partial (10%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0068679.1 |
length: 79 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF01582 |
TIR |
2e-10 |
3-64 |
| ProfileScan |
PS50104 |
TIR |
8.606 |
1-70 |
| superfamily |
SSF52200 |
Toll/Interleukin |
3.6e-09 |
1-73 |
| no_ID |
|
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
1.9e-17 |
2-77 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
1.9e-17 |
2-77 |
- Wolf-PSORT
Lj0g3v0068679.1 cyto 5, nucl 2, mito 2, extr 2, chlo 1, vacu 1, E.R. 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0068679.1 |
|