Miyakogusa Predicted Gene

Lj0g3v0058059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KXX1_SOYBN 1178 79.3 88.2 (tr|I1KXX1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G27110.1 791 54.1 73.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:9538572-9540647 REVERSE LENGTH=691
Medicago Medtr1g014340.1 1106 76.8 85.2 | PPR containing plant-like protein | HC | chr1:3000992-3003085 | 20130731
Soybean Glyma08g41690.1 1114 79.6 88.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0058059.1 length: 711 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.024 72-96
246-271
347-368
445-473
548-570
HMMPfam PF13041 PPR_2 1.4e-10 170-219
271-319
376-420
474-520
HMMTigr TIGR00756 PPR: 8.6e-08 174-207
274-307
377-408
476-509
ProfileScan PS51375 PPR 8.659 2-36
69-99
37-67
171-205
140-170
206-240
272-306
241-271
307-341
342-372
373-407
474-508
443-473
408-442
509-544
545-575
612-646
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.9e-07 336-456
457-633
no_ID  
HMMPanther PTHR24015 FAMILY 5.4e-231 22-689
HMMPanther PTHR24015:SF88 UNKNOWN 5.4e-231 22-689
Seg seg seg NA 137-148
superfamily SSF48452 TPR-like 3.6e-05 163-631
145-298
Wolf-PSORT
Lj0g3v0058059.1	chlo 7, nucl 2, mito 2, cyto 1, plas 1, cysk 1, cyto_mito 1, cysk_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0058059.1