Miyakogusa Predicted Gene
- Lj0g3v0054389.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T952_LOTJA |
394 |
91.8 |
91.8 |
(tr|I3T952) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G44560.1 |
323 |
74.3 |
85.6 |
| Symbols: VPS2.2 | SNF7 family protein | chr5:17946081-17948222 FORWARD LENGTH=222 |
| Medicago |
Medtr2g047875.1 |
358 |
84.3 |
89.4 |
| charged multivesicular body protein | HC | chr2:20962877-20956118 | 20130731 |
| Soybean |
Glyma09g10020.1 |
375 |
86.8 |
90.0 |
|
| LJGI |
gnl|LJGI|TC81699 |
1308 |
100.0 |
100.0 |
similar to UniRef100_UPI0000162818 Cluster: SNF7 family protein; n=1; Arabidopsis thaliana|Rep: SNF7 family protein - Arabidopsis thaliana, partial (91%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0054389.1 |
length: 219 aa. |
| IPR005024 |
Snf7 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0015031 |
protein transport |
|
|
| HMMPfam |
PF03357 |
Snf7 |
6.1e-36 |
20-187 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
147-168 |
| HMMPanther |
PTHR10476 |
CHARGED |
8.7e-99 |
1-219 |
| HMMPanther |
PTHR10476:SF4 |
CHARGED |
8.7e-99 |
1-219 |
| Seg |
seg |
seg |
NA |
149-165 |
- Wolf-PSORT
Lj0g3v0054389.1 nucl_plas 3.5, chlo 3, nucl 3, mito 3, chlo_mito 3, cyto 2, plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0054389.1 |
|