Miyakogusa Predicted Gene

Lj0g3v0054369.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MCE9_SOYBN 338 81.1 90.5 (tr|K7MCE9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G44550.1 192 55.1 72.7 | Symbols: | Uncharacterised protein family (UPF0497) | chr5:17942100-17943174 REVERSE LENGTH=197
Medicago Medtr0097s0070.1 306 82.8 88.7 | CASP POPTRDRAFT-like protein | HC | scaffold0097:39509-37693 | 20130731
Soybean Glyma15g22100.1 293 85.4 95.7  
LJGI gnl|LJGI|GO036682 299 82.6 82.6 weakly similar to UniRef100_Q9FI10 Cluster: UPF0497 membrane protein At5g44550; n=1; Arabidopsis thaliana|Rep: UPF0497 membrane protein At5g44550 - Arabidopsis thaliana (Mouse-ear cress), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0054369.1 length: 199 aa.
IPR006459 Uncharacterised protein family UPF0497, trans-membrane plant subgroup
method AccNumber shortName E-value location
HMMTigr TIGR01569 A_tha_TIGR01569: 7.7e-46 28-187
IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
HMMPfam PF04535 DUF588 8.8e-38 23-176
no_ID  
HMMPanther PTHR11615 NITRATE, 3.1e-50 18-190
HMMPanther PTHR11615:SF59 INTEGRAL 3.1e-50 18-190
Putative transmembrane regions
  From To
TM segments
SOSUI		 27 49
111 133
165 187
Wolf-PSORT
Lj0g3v0054369.1	plas 12, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0054369.1