Miyakogusa Predicted Gene

Lj0g3v0042119.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LCV4_SOYBN 429 66.6 80.4 (tr|K7LCV4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G27290.1 261 45.3 62.4 | Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783
Medicago Medtr0090s0020.1 437 63.0 74.6 | S-locus lectin kinase family protein | HC | scaffold0090:10869-7455 | 20130731
Soybean Glyma06g40560.1 422 61.3 74.8  
LJGI gnl|LJGI|FS320258 131 88.5 88.5 weakly similar to UniRef100_Q01963 Cluster: S-locus receptor kinase precursor; n=2; Brassica napus|Rep: S-locus receptor kinase precursor - Brassica napus var. napus, partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0042119.1 length: 328 aa.
IPR000742 Epidermal growth factor-like domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50026 EGF_3 9.561 147-182
IPR000858 S-locus glycoprotein
Biological Process GO:0048544 recognition of pollen    
HMMPfam PF00954 S_locus_glycop 2.4e-28 71-180
IPR001480 Bulb-type lectin domain
HMMPfam PF01453 B_lectin 1.3e-10 5-45
superfamily SSF51110 alpha-D-mannose-specific 1.4e-09 2-44
IPR003609 Apple-like
HMMSmart SM00473 divergent 5.5e-13 205-283
ProfileScan PS50948 PAN 9.651 202-284
IPR013227 PAN-2 domain
HMMPfam PF08276 PAN_2 1.7e-22 202-270
no_ID  
HMMPanther PTHR11795 UNCHARACTERIZED 8.4e-59 6-287
HMMPanther PTHR11795:SF72 OS07G0550500 8.4e-59 6-287
Seg seg seg NA 298-315
Putative transmembrane regions
  From To
TM segments
SOSUI		 300 322
Wolf-PSORT
Lj0g3v0042119.1	cyto 5, nucl 4, chlo 3, golg 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0042119.1