Miyakogusa Predicted Gene

Lj3g3v3527450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527450.1 Non Chatacterized Hit- tr|F6I128|F6I128_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.88,0.0000000000004,seg,NULL,CUFF.45952.1
         (151 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7LSN6_SOYBN (tr|K7LSN6) Uncharacterized protein OS=Glycine max ...    82   5e-14
K7LSN5_SOYBN (tr|K7LSN5) Uncharacterized protein OS=Glycine max ...    82   5e-14
G7JPK5_MEDTR (tr|G7JPK5) Nucleoporin NUP188-like protein OS=Medi...    80   3e-13

>K7LSN6_SOYBN (tr|K7LSN6) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1867

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 25   SLGRAATGERMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFXX-XXXXXXXXXX 83
            S GRA TG R+ DEL+   +D   QSFLATIETLSS LDAS+D+LNF             
Sbjct: 1357 SQGRATTGGRISDELIFAFMDNICQSFLATIETLSSVLDASEDILNFLACQAELLLQLTR 1416

Query: 84   XXXXXXXXXXXXXXXKCATSGLKILSELKLVPSEAXXXXXXXXXXXXXXXXXXXXXXHSG 143
                           KCA+SGLK+LS LK +PSEA                      HS 
Sbjct: 1417 TVCKSLSLHVSLLVLKCASSGLKLLSALKPLPSEANLIMKLLLTLLLSVLQSDSLNAHSD 1476

Query: 144  GATNKSSG 151
            GAT++SSG
Sbjct: 1477 GATDESSG 1484


>K7LSN5_SOYBN (tr|K7LSN5) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1966

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 25   SLGRAATGERMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFXX-XXXXXXXXXX 83
            S GRA TG R+ DEL+   +D   QSFLATIETLSS LDAS+D+LNF             
Sbjct: 1357 SQGRATTGGRISDELIFAFMDNICQSFLATIETLSSVLDASEDILNFLACQAELLLQLTR 1416

Query: 84   XXXXXXXXXXXXXXXKCATSGLKILSELKLVPSEAXXXXXXXXXXXXXXXXXXXXXXHSG 143
                           KCA+SGLK+LS LK +PSEA                      HS 
Sbjct: 1417 TVCKSLSLHVSLLVLKCASSGLKLLSALKPLPSEANLIMKLLLTLLLSVLQSDSLNAHSD 1476

Query: 144  GATNKSSG 151
            GAT++SSG
Sbjct: 1477 GATDESSG 1484


>G7JPK5_MEDTR (tr|G7JPK5) Nucleoporin NUP188-like protein OS=Medicago truncatula
            GN=MTR_4g075330 PE=4 SV=1
          Length = 1967

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 18   IFHRILQSLGRAATGERMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFXX-XXX 76
            ++H    S GRA TGER+P+EL+ TCID   QSFL TI  LS  LDAS+DMLN       
Sbjct: 1359 VYHD--DSKGRATTGERIPNELIFTCIDNICQSFLDTIVRLSPVLDASEDMLNILACQVE 1416

Query: 77   XXXXXXXXXXXXXXXXXXXXXXKCATSGLKILSELKLVPSEAXXXXXXXXXXXXXXXXXX 136
                                  KCA+SGLK+LSE KL+PS+A                  
Sbjct: 1417 LLLLFTRTVSNGLSIDTSLLVMKCASSGLKLLSEFKLLPSKANLIMKLLLTLLLLVLQSN 1476

Query: 137  XXXXHSGGATNKSSG 151
                H   A ++ SG
Sbjct: 1477 SLNLHFNAAADEGSG 1491