Miyakogusa Predicted Gene

Lj3g3v3338560.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3338560.1 Non Chatacterized Hit- tr|Q9SZ07|Q9SZ07_ARATH
Putative uncharacterized protein AT4g34420
OS=Arabidop,52.08,3e-17,seg,NULL,CUFF.45661.1
         (163 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7JG42_MEDTR (tr|G7JG42) SWI/SNF complex subunit SMARCC1 OS=Medi...    94   1e-17
K7LT00_SOYBN (tr|K7LT00) Uncharacterized protein OS=Glycine max ...    82   5e-14
I1LJE7_SOYBN (tr|I1LJE7) Uncharacterized protein OS=Glycine max ...    79   4e-13
R0F2V2_9BRAS (tr|R0F2V2) Uncharacterized protein OS=Capsella rub...    79   7e-13
D7MF14_ARALL (tr|D7MF14) Putative uncharacterized protein OS=Ara...    78   1e-12
K4B3G4_SOLLC (tr|K4B3G4) Uncharacterized protein OS=Solanum lyco...    75   1e-11
M0ZJ74_SOLTU (tr|M0ZJ74) Uncharacterized protein OS=Solanum tube...    73   3e-11
M5VJC1_PRUPE (tr|M5VJC1) Uncharacterized protein OS=Prunus persi...    71   1e-10
Q9SZ07_ARATH (tr|Q9SZ07) Putative uncharacterized protein AT4g34...    71   1e-10
F6HQL6_VITVI (tr|F6HQL6) Putative uncharacterized protein OS=Vit...    67   2e-09
B9RBE0_RICCO (tr|B9RBE0) Transcription regulatory protein SWI3, ...    63   4e-08
M4D4X6_BRARP (tr|M4D4X6) Uncharacterized protein OS=Brassica rap...    62   1e-07
B9HRP3_POPTR (tr|B9HRP3) Chromatin remodeling complex subunit OS...    62   1e-07
B9H0P7_POPTR (tr|B9H0P7) Chromatin remodeling complex subunit OS...    57   3e-06

>G7JG42_MEDTR (tr|G7JG42) SWI/SNF complex subunit SMARCC1 OS=Medicago truncatula
           GN=MTR_4g069830 PE=4 SV=1
          Length = 1041

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 78/132 (59%), Gaps = 16/132 (12%)

Query: 1   MEEKRRETASQPPPTTDSPASEPVPPRRRAGGNKRKASA---SNPSSIPSKRATREKASP 57
           MEEKR      PP T D+PA EP P RRRAGGNKRK+ +   SN +S  SKR TREKASP
Sbjct: 1   MEEKR------PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASP 54

Query: 58  IHFPPLHNGPLTRARQIP-SNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGESSALA 116
           +H PP HNGPLTRARQIP ++                  VKH   A Q Q L     A  
Sbjct: 55  LHHPPPHNGPLTRARQIPNNSSAAANSSTAGGSASAPAAVKH---APQTQAL---VVAAE 108

Query: 117 EMLKKESEWESL 128
           ++ KKESEWES+
Sbjct: 109 QLKKKESEWESM 120


>K7LT00_SOYBN (tr|K7LT00) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1016

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 81/132 (61%), Gaps = 15/132 (11%)

Query: 1   MEEKRRETASQPPPTTDSPASEPVPPRRRAGGNKRK---ASASNPSSIPSKRATREKASP 57
           MEEKRR+ A       DSPASEP   RRRAG NKRK    SAS  SS PSKRA R+KASP
Sbjct: 1   MEEKRRDAAPS---AADSPASEPATSRRRAGANKRKFGTLSASGSSSAPSKRAARDKASP 57

Query: 58  IHFPPL-HNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGESSALA 116
           + FPP  HNGPLTRARQ P+NL                 VK SERA        ES+ALA
Sbjct: 58  L-FPPAPHNGPLTRARQTPNNL----SASSSAAASAPAAVKRSERAHPS---AAESTALA 109

Query: 117 EMLKKESEWESL 128
           E LKKESEWE+L
Sbjct: 110 EQLKKESEWETL 121


>I1LJE7_SOYBN (tr|I1LJE7) Uncharacterized protein OS=Glycine max PE=4 SV=2
          Length = 1047

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/131 (54%), Positives = 81/131 (61%), Gaps = 12/131 (9%)

Query: 1   MEEKRRETASQPPPTTDSPASEPVPPRRRAGGNKRKASASNPSSIPS---KRATREKASP 57
           MEEKRR+ A       DSPASEP   RRRAG NKRK+ A + S   S   KRA+R+KASP
Sbjct: 30  MEEKRRDAAPS---AADSPASEPATSRRRAGANKRKSGALSASGSSSAPSKRASRDKASP 86

Query: 58  IHFPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGESSALAE 117
           +H PPLHNGPLTRARQ P+NL                 VK SERA        ES+ALAE
Sbjct: 87  LHPPPLHNGPLTRARQTPNNL---ASASSSAGASAPAAVKRSERA---HPSAAESAALAE 140

Query: 118 MLKKESEWESL 128
            LKKESEWE+L
Sbjct: 141 QLKKESEWETL 151


>R0F2V2_9BRAS (tr|R0F2V2) Uncharacterized protein OS=Capsella rubella
          GN=CARUB_v10004067mg PE=4 SV=1
          Length = 981

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 58/87 (66%), Gaps = 9/87 (10%)

Query: 1  MEEKRRE---TASQPPPTTDSPASEPVP-PRRRAGGNKRKASASN----PSSIPSKRA-T 51
          MEEKRR+   T +    + DSPASEP+P  RRR GG KRKA+A       SS PSKR  T
Sbjct: 1  MEEKRRDSSGTLASAGSSGDSPASEPMPATRRRGGGLKRKANALGGSYFSSSTPSKRMLT 60

Query: 52 REKASPIHFPPLHNGPLTRARQIPSNL 78
          REKA    F P+HNGPLTRARQ PSN+
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPSNM 87


>D7MF14_ARALL (tr|D7MF14) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_491219 PE=4 SV=1
          Length = 983

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 9/85 (10%)

Query: 1  MEEKRRETASQ---PPPTTDSPASEPVP-PRRRAGGNKRKASA---SN-PSSIPSKRA-T 51
          MEEKRR++A        + DSPASEP+P PRRR GG KRKA+A   SN  SS PSKR  T
Sbjct: 1  MEEKRRDSAGTLAFAGSSGDSPASEPMPAPRRRGGGLKRKANALGGSNFSSSTPSKRMLT 60

Query: 52 REKASPIHFPPLHNGPLTRARQIPS 76
          REKA    F P+HNGPLTRARQ PS
Sbjct: 61 REKAMLASFSPVHNGPLTRARQAPS 85


>K4B3G4_SOLLC (tr|K4B3G4) Uncharacterized protein OS=Solanum lycopersicum
          GN=Solyc01g109510.2 PE=4 SV=1
          Length = 945

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 11/87 (12%)

Query: 1  MEEKRRETASQPPPTTDSPASEPVPP-------RRRAGGNKRKASA--SNPSSIP-SKRA 50
          MEEKR++T + PPP  D+P +    P       RRR GGNKRKASA  S  SS P S  +
Sbjct: 1  MEEKRKDTGT-PPPAADTPMTSADVPSAEAPTSRRRGGGNKRKASAIGSGASSTPPSTLS 59

Query: 51 TREKASPIHFPPLHNGPLTRARQIPSN 77
           R+K S   FPP+HNGPLTRARQ P+N
Sbjct: 60 KRQKQSAAPFPPIHNGPLTRARQQPNN 86


>M0ZJ74_SOLTU (tr|M0ZJ74) Uncharacterized protein OS=Solanum tuberosum
          GN=PGSC0003DMG400000702 PE=4 SV=1
          Length = 945

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 56/87 (64%), Gaps = 11/87 (12%)

Query: 1  MEEKRRETASQPPPTTDSPASEPVPP-------RRRAGGNKRKASA--SNPSSIP-SKRA 50
          MEEKR++ A  PPP  D+P +    P       RRR GG+KRKASA  S  SS P S  +
Sbjct: 1  MEEKRKD-AGTPPPAADTPMTSADVPSAEAPTSRRRGGGHKRKASAIGSGASSTPPSTLS 59

Query: 51 TREKASPIHFPPLHNGPLTRARQIPSN 77
           R+K S + FPP+HNGPLTRARQ P+N
Sbjct: 60 KRQKQSAVPFPPIHNGPLTRARQQPNN 86


>M5VJC1_PRUPE (tr|M5VJC1) Uncharacterized protein OS=Prunus persica
          GN=PRUPE_ppa000770mg PE=4 SV=1
          Length = 1009

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/79 (62%), Positives = 54/79 (68%), Gaps = 5/79 (6%)

Query: 1  MEEKRRETA-SQPPPTTDSPASEPVPPRRRAGGNKRKA---SASNPSSIPSKRATREKAS 56
          MEEKRR+ A +QPP   +SPA+EP   RRR G  KRKA     S  SS PSKR TREKA 
Sbjct: 1  MEEKRRDAAGAQPPSNAESPAAEPSSARRRGGAQKRKASSLGGSTSSSTPSKRFTREKAM 60

Query: 57 PIHFPPLHNGPLTRARQIP 75
            H PP+HNGPLTRARQ P
Sbjct: 61 LSH-PPIHNGPLTRARQGP 78


>Q9SZ07_ARATH (tr|Q9SZ07) Putative uncharacterized protein AT4g34420
           OS=Arabidopsis thaliana GN=AT4g34420 PE=4 SV=1
          Length = 403

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 6/66 (9%)

Query: 17  DSPASEPVP-PRRRAGGNKRKASA----SNPSSIPSKRA-TREKASPIHFPPLHNGPLTR 70
           DSPASEP+P PRRR GG KRKA+A    +  SS PSKR  TREKA    F P+HNGPLTR
Sbjct: 260 DSPASEPMPAPRRRGGGLKRKANALGGSNFFSSAPSKRMLTREKAMLASFSPVHNGPLTR 319

Query: 71  ARQIPS 76
           ARQ PS
Sbjct: 320 ARQAPS 325


>F6HQL6_VITVI (tr|F6HQL6) Putative uncharacterized protein OS=Vitis vinifera
          GN=VIT_03s0063g02410 PE=2 SV=1
          Length = 1023

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 52/92 (56%), Gaps = 16/92 (17%)

Query: 1  MEEKRRETASQPPP-----------TTDSPASEPVPPRRRAGGNKRKA---SASNPSSIP 46
          MEEKRRE  S PP            T   P SEP   RRRAGG KRK+   SASN  S P
Sbjct: 1  MEEKRREAGSLPPASSSAGTVTAKVTETEPKSEPPSSRRRAGGQKRKSNNLSASN--STP 58

Query: 47 SKRATREKASPIHFPPLHNGPLTRARQIPSNL 78
          SKR  REKA       +HNGP TRARQ P+N+
Sbjct: 59 SKRLAREKALAPPLASIHNGPCTRARQSPNNV 90


>B9RBE0_RICCO (tr|B9RBE0) Transcription regulatory protein SWI3, putative
          OS=Ricinus communis GN=RCOM_1674900 PE=4 SV=1
          Length = 983

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 46/67 (68%), Gaps = 5/67 (7%)

Query: 17 DSPAS-EPVPP-RRRAGGNKRKASA---SNPSSIPSKRATREKASPIHFPPLHNGPLTRA 71
          DSPAS EP    RRRA G KRKA+A   SN SS PSKR TREKA+    P  + GPLTRA
Sbjct: 16 DSPASAEPTSSSRRRASGQKRKANALSTSNASSTPSKRLTREKAAISQIPVHNGGPLTRA 75

Query: 72 RQIPSNL 78
          RQ P+NL
Sbjct: 76 RQSPNNL 82


>M4D4X6_BRARP (tr|M4D4X6) Uncharacterized protein OS=Brassica rapa subsp.
          pekinensis GN=Bra011533 PE=4 SV=1
          Length = 932

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 51/82 (62%), Gaps = 5/82 (6%)

Query: 1  MEEKRRE---TASQPPPTTDSPASEPVPPRRRAGGNKRKASASNPSSIPSKRA-TREKAS 56
          MEE+RR+   T +    + DSPASEP P RRR         ASN SS  SKR  TREKA 
Sbjct: 1  MEERRRDAGGTLASAGSSGDSPASEPTP-RRRVKRKSNALGASNSSSTSSKRMLTREKAM 59

Query: 57 PIHFPPLHNGPLTRARQIPSNL 78
             F P+HNGPLTRARQ PSN+
Sbjct: 60 LASFSPVHNGPLTRARQAPSNM 81


>B9HRP3_POPTR (tr|B9HRP3) Chromatin remodeling complex subunit OS=Populus
          trichocarpa GN=CHB901 PE=4 SV=1
          Length = 1010

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 47/66 (71%), Gaps = 5/66 (7%)

Query: 17 DSPAS-EPVPPRRRAGGNKRKA-SASN--PSSIPSKRATREKASPIHFPPLHNGPLTRAR 72
          DSPAS EP P RRR GG+KRKA S SN   S +PSKR TREKA+ I     HNGP TRAR
Sbjct: 11 DSPASAEPGPSRRRPGGHKRKANSLSNFFSSPLPSKRLTREKAA-ISNLSNHNGPFTRAR 69

Query: 73 QIPSNL 78
          QIP+ L
Sbjct: 70 QIPNIL 75


>B9H0P7_POPTR (tr|B9H0P7) Chromatin remodeling complex subunit OS=Populus
          trichocarpa GN=CHB902 PE=4 SV=1
          Length = 1005

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 4/65 (6%)

Query: 17 DSPAS-EPVPPRRRAGGNKRKA--SASNPSSIPSKRATREKASPIHFPPLHNGPLTRARQ 73
          DSPAS EP   RRRAGG+KRKA  S S  S + SKR TREKA   +   +HNGPLTRARQ
Sbjct: 11 DSPASFEPATSRRRAGGHKRKASLSNSLSSPLSSKRLTREKAGFSNL-SIHNGPLTRARQ 69

Query: 74 IPSNL 78
          IP  L
Sbjct: 70 IPYIL 74