Miyakogusa Predicted Gene

Lj3g3v0966690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0966690.1 Non Chatacterized Hit- tr|E0VJG1|E0VJG1_PEDHC
Protein MLP1, putative OS=Pediculus humanus subsp.
cor,53.33,0.00003,SET domain,NULL; SET,SET domain; no
description,NULL,CUFF.41957.1
         (47 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7N1Z6_SOYBN (tr|K7N1Z6) Uncharacterized protein OS=Glycine max ...    55   6e-06

>K7N1Z6_SOYBN (tr|K7N1Z6) Uncharacterized protein OS=Glycine max PE=3 SV=1
          Length = 552

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 9/50 (18%)

Query: 2   MMYAVRNIPAGRELTYNYN----FYNSRLNKADIIKCYCSSQECKGQIYV 47
           M++A ++IPAGREL+++YN    F N R N      CYC SQEC GQIY+
Sbjct: 493 MLFAAKDIPAGRELSFDYNSKGKFINDRSNS-----CYCGSQECNGQIYI 537