Miyakogusa Predicted Gene

Lj1g3v4467780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4467780.1 tr|D0Z8F2|D0Z8F2_EDWTE Lysine/cadaverine
transport protein (APC family) OS=Edwardsiella tarda (strai,30.36,6.1,
,CUFF.32425.1
         (65 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I3S1C8_LOTJA (tr|I3S1C8) Uncharacterized protein OS=Lotus japoni...   105   6e-21

>I3S1C8_LOTJA (tr|I3S1C8) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
          Length = 65

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/65 (81%), Positives = 53/65 (81%)

Query: 1  MEEVQLHELNLEERLCLPLATMPCLFILLSLKGERNSIQDLNXXXXXXXXXXXXHMQGFT 60
          MEEVQLHELNLEERLCLPLATMPCLFILLSLKGERNSIQDLN            HMQGFT
Sbjct: 1  MEEVQLHELNLEERLCLPLATMPCLFILLSLKGERNSIQDLNFVLIILVIFFFLHMQGFT 60

Query: 61 WLISL 65
          WLISL
Sbjct: 61 WLISL 65