Miyakogusa Predicted Gene

Lj1g3v1008950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1008950.1 Non Chatacterized Hit- tr|I1JYZ6|I1JYZ6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,50,0.000000003,
,CUFF.26663.1
         (72 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7KM45_SOYBN (tr|K7KM45) Uncharacterized protein OS=Glycine max ...    58   1e-06
K7KUL5_SOYBN (tr|K7KUL5) Uncharacterized protein OS=Glycine max ...    57   3e-06

>K7KM45_SOYBN (tr|K7KM45) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 286

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 13/77 (16%)

Query: 1   MWSCHRAPRAGSSAVRSGQV-----TELLPDKFMCSMLMDVCSNLRYLDKGKQFYTFCFK 55
           +W+CHRA   G   +   Q       E LPD+F CS+LM VCSNLR LDK  +       
Sbjct: 218 IWACHRA---GHHELALEQFYWMRGAEFLPDQFTCSVLMSVCSNLRDLDKDWRIL----- 269

Query: 56  CIYLQNEINGIQLCVLP 72
           C  L+N+INGIQL  +P
Sbjct: 270 CGSLRNKINGIQLYAIP 286


>K7KUL5_SOYBN (tr|K7KUL5) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 286

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 7/74 (9%)

Query: 1   MWSCHRAPRAGSSAVRSGQV--TELLPDKFMCSMLMDVCSNLRYLDKGKQFYTFCFKCIY 58
           +W+CH A     +  +  ++   ELLPD+F CS+LM VCSNLR LDK  +  +      Y
Sbjct: 218 IWACHSAGHHELALEQFYRMRGAELLPDQFTCSVLMSVCSNLRDLDKDWRILSG-----Y 272

Query: 59  LQNEINGIQLCVLP 72
           L+N+INGI L  +P
Sbjct: 273 LRNKINGIHLYAIP 286