Miyakogusa Predicted Gene

Lj0g3v0359579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359579.1 tr|G7IF63|G7IF63_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_1g08,74.29,0.00000001,seg,NULL,CUFF.24746.1
         (49 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

G7IF63_MEDTR (tr|G7IF63) Zinc finger CCCH domain-containing prot...    59   8e-07

>G7IF63_MEDTR (tr|G7IF63) Zinc finger CCCH domain-containing protein
          OS=Medicago truncatula GN=MTR_1g088590 PE=4 SV=1
          Length = 1035

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/30 (80%), Positives = 28/30 (93%)

Query: 20 HLPVMSLRSKIVEKVQGNRVTLIIGETGCG 49
          HLPVMS+R KI++K+Q NRVTLIIGETGCG
Sbjct: 29 HLPVMSMRKKIIDKIQQNRVTLIIGETGCG 58