Miyakogusa Predicted Gene
- Lj0g3v0279619.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0279619.1 Non Chatacterized Hit- tr|B9RET3|B9RET3_RICCO
5'->3' exoribonuclease, putative OS=Ricinus communis G,46.51,2e-16,
,CUFF.18604.1
(126 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1NIU3_SOYBN (tr|I1NIU3) Uncharacterized protein OS=Glycine max ... 142 4e-32
I1NIU2_SOYBN (tr|I1NIU2) Uncharacterized protein OS=Glycine max ... 142 4e-32
I1NC68_SOYBN (tr|I1NC68) Uncharacterized protein OS=Glycine max ... 142 4e-32
G7L0T7_MEDTR (tr|G7L0T7) 5'-3' exoribonuclease OS=Medicago trunc... 139 5e-31
I1JRL0_SOYBN (tr|I1JRL0) Uncharacterized protein OS=Glycine max ... 132 4e-29
M5W757_PRUPE (tr|M5W757) Uncharacterized protein OS=Prunus persi... 94 1e-17
B9RET3_RICCO (tr|B9RET3) 5'->3' exoribonuclease, putative OS=Ric... 90 4e-16
B9I8A8_POPTR (tr|B9I8A8) Predicted protein OS=Populus trichocarp... 89 7e-16
G7I7E8_MEDTR (tr|G7I7E8) 5'-3' exoribonuclease OS=Medicago trunc... 86 4e-15
B9MZH7_POPTR (tr|B9MZH7) Predicted protein OS=Populus trichocarp... 80 2e-13
E5LBH0_SOLLC (tr|E5LBH0) 5'-3' exoribonuclease 4 OS=Solanum lyco... 75 1e-11
A5B457_VITVI (tr|A5B457) Putative uncharacterized protein OS=Vit... 72 5e-11
E5GBR7_CUCME (tr|E5GBR7) 5'-3' exoribonuclease OS=Cucumis melo s... 72 7e-11
>I1NIU3_SOYBN (tr|I1NIU3) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 931
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 8/127 (6%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLPNSGP 60
+ RP+Y GGQNDR N + Q R +QEQ +N K+ F ALTMEEG RPRSSRLPNS P
Sbjct: 809 ITRPKY-----GGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGERPRSSRLPNSRP 863
Query: 61 I-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDKQT-KVYQVKKQEP 118
+ NL+PRF+QNM +PPPKW+T+ PP N M++RHQEAA G +DKQT KVYQVK ++P
Sbjct: 864 VTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQTKKVYQVKTRQP 923
Query: 119 QDTPDCG 125
DTP+ G
Sbjct: 924 -DTPEYG 929
>I1NIU2_SOYBN (tr|I1NIU2) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 932
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 8/127 (6%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLPNSGP 60
+ RP+Y GGQNDR N + Q R +QEQ +N K+ F ALTMEEG RPRSSRLPNS P
Sbjct: 810 ITRPKY-----GGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGERPRSSRLPNSRP 864
Query: 61 I-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDKQT-KVYQVKKQEP 118
+ NL+PRF+QNM +PPPKW+T+ PP N M++RHQEAA G +DKQT KVYQVK ++P
Sbjct: 865 VTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQTKKVYQVKTRQP 924
Query: 119 QDTPDCG 125
DTP+ G
Sbjct: 925 -DTPEYG 930
>I1NC68_SOYBN (tr|I1NC68) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 957
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 92/141 (65%), Gaps = 16/141 (11%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR--------- 51
+ RPRYP +SNGG N++ NFR Q RSQH EQ YN + GF +TMEEG RPR
Sbjct: 817 ITRPRYPVSSNGGNNEKQNFRIQDRSQHHEQYYNGRTGFHTMTMEEGARPRPYAVPSPRT 876
Query: 52 ----SSRLPNSGPI-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDK 106
SR PNSGP N + +FVQNMG P+PPP WIT+AP N +Y+ HQE A G YDK
Sbjct: 877 QVVMLSRSPNSGPTTNGQHQFVQNMGPPIPPPNWITRAPDTNGIYAWHQETALGGA-YDK 935
Query: 107 Q-TKVYQVKKQEPQDTPDCGN 126
Q KVYQ K ++PQD P+ GN
Sbjct: 936 QHIKVYQAKTRQPQDMPEYGN 956
>G7L0T7_MEDTR (tr|G7L0T7) 5'-3' exoribonuclease OS=Medicago truncatula
GN=MTR_7g114570 PE=4 SV=1
Length = 956
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 96/141 (68%), Gaps = 16/141 (11%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLP---- 56
M RPR+P SNG QNDR N R Q RSQH EQ +N+K GF ALT++EGVRPRSS +P
Sbjct: 815 MTRPRFPIASNGWQNDRQNIRIQDRSQHHEQFHNMKTGFQALTIDEGVRPRSSAVPSPKT 874
Query: 57 ---------NSG-PINLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDK 106
NSG NL+P+FVQN+G P+PPP WI+KAP N MY+RHQEAA G YDK
Sbjct: 875 PAMMLMRPQNSGHTTNLQPQFVQNIGPPIPPPNWISKAPDTNGMYARHQEAAVGGA-YDK 933
Query: 107 QT-KVYQVKKQEPQDTPDCGN 126
KVYQ+K + PQD P+ GN
Sbjct: 934 PIKKVYQIKTRNPQDMPEQGN 954
>I1JRL0_SOYBN (tr|I1JRL0) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 960
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 87/141 (61%), Gaps = 16/141 (11%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR--------- 51
+ RPRYP +SNGG ND+ NFR Q RS H +Q YN GF + MEEG R R
Sbjct: 820 ITRPRYPVSSNGGHNDKQNFRIQDRSYHHDQYYNGTTGFYTMAMEEGARARPYAVPLPRT 879
Query: 52 ----SSRLPNSGPI-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDK 106
SR PNSG N + +FVQNMG P+PPP WIT+ P N +Y+ HQE A G YDK
Sbjct: 880 PAVTLSRPPNSGSTTNGQHQFVQNMGPPIPPPNWITRVPDTNGIYAGHQETALGGT-YDK 938
Query: 107 Q-TKVYQVKKQEPQDTPDCGN 126
Q KVYQVK ++PQD P+ GN
Sbjct: 939 QNMKVYQVKTRQPQDMPEYGN 959
>M5W757_PRUPE (tr|M5W757) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa000881mg PE=4 SV=1
Length = 972
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 84/147 (57%), Gaps = 24/147 (16%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSY-------------NVKAGFSALTMEEG 47
MARPR+P +SNG Q DR +FR Q R Q+QEQS+ +++ G S LTMEE
Sbjct: 819 MARPRFP-SSNGMQGDRQSFRAQERVQYQEQSFRTQERVQYQEQYHSLRTGMSGLTMEES 877
Query: 48 VRPRSSR----LPNSG-PINLEPRFVQNMGRPVPPPKWITKAPPAN-EMYSRHQEAASGA 101
VR RS +PNSG N + +F Q+ P PPPKWI K AN +Y+R QE G
Sbjct: 878 VRTRSPAGQPGMPNSGYSTNPQHQFAQD-ALPSPPPKWINKESTANGGLYNRQQETGFGG 936
Query: 102 VPYDKQ--TKVYQVKKQEPQDTPDCGN 126
Y+ Q KVYQVK + PQD D G+
Sbjct: 937 A-YEPQPVKKVYQVKTRAPQDMSDAGD 962
>B9RET3_RICCO (tr|B9RET3) 5'->3' exoribonuclease, putative OS=Ricinus communis
GN=RCOM_1428570 PE=4 SV=1
Length = 964
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR-----SSRL 55
M+ PR P SNG ++RHNFRTQ R Q+ EQ ++K G SALTMEE V+ R S R
Sbjct: 825 MSNPRSPLFSNGVSSNRHNFRTQDRVQYHEQYRDLKTGMSALTMEENVKSRPPAVMSQRT 884
Query: 56 PNSG-PINLEPRFVQNMG-RPVPPPKWITKAPPAN-EMYSRHQEAASGAVPYDKQTK-VY 111
N+G +L+ +F QN+G P PP KWI KA + EMY R + GA +KQ K +Y
Sbjct: 885 QNTGYSSSLQQQFEQNLGALPSPPAKWIGKATDTDAEMYFRQETMLRGA--NEKQAKQIY 942
Query: 112 QVKKQEPQD 120
QVK + Q+
Sbjct: 943 QVKTRAAQE 951
>B9I8A8_POPTR (tr|B9I8A8) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_729786 PE=4 SV=1
Length = 965
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 11/133 (8%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR-----SSRL 55
M+ PRY SNG Q++RHNFRTQ Q+ +Q +N+ G SALT+EE +R R S R+
Sbjct: 824 MSNPRYRSLSNGVQSNRHNFRTQDGVQYHQQYHNLSTGVSALTVEENIRSRAPAVISPRM 883
Query: 56 PNSGPI-NLEPRFVQNMG-RPVPPPKWITKAPPANE-MYSRHQEAASGAVPYDKQTK-VY 111
PN G NL+ + QN G PP WI K N MY + + + G P +KQ K VY
Sbjct: 884 PNPGNTPNLQNQAEQNTGLLSSPPTNWINKTAAGNTGMYFKQKSTSIG--PNEKQVKQVY 941
Query: 112 QVKKQEPQDTPDC 124
QVK Q Q+TPD
Sbjct: 942 QVKTQVAQETPDI 954
>G7I7E8_MEDTR (tr|G7I7E8) 5'-3' exoribonuclease OS=Medicago truncatula
GN=MTR_1g081590 PE=4 SV=1
Length = 1029
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 62/105 (59%), Gaps = 17/105 (16%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRL-PNSG 59
M R RYP +SN GQ DR NFRTQ R +HQEQ NVK GFSALT G R + + NSG
Sbjct: 825 MTRHRYPVSSNAGQVDRQNFRTQDRPRHQEQFQNVKTGFSALT--NGGRIETCTIEANSG 882
Query: 60 PINLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPY 104
P PV P KW TKA P N +Y R QEAASG VP+
Sbjct: 883 P-------------PVRPLKWNTKA-PINGVYPRRQEAASGVVPH 913
>B9MZH7_POPTR (tr|B9MZH7) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_595465 PE=4 SV=1
Length = 948
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR-----SSRL 55
M+ YP +SNG Q +RHN R Q R Q+ +Q +++ G SALT+EE R R S R+
Sbjct: 813 MSNHMYPVSSNGVQGNRHNSRPQDRVQYHQQYHDLSTGVSALTVEENFRSRAPAVISPRI 872
Query: 56 PNSG-PINLEPRFVQNMG-RPVPPPKWITKAPPANE-MYSRHQEAASGAVPYDKQTK-VY 111
PN G NL +F N G P PP WI K + MY R + G P +KQ K VY
Sbjct: 873 PNPGYTTNLYNQFEHNTGPLPSPPTNWINKTAAGDAGMYFRQDTTSRG--PNEKQLKQVY 930
Query: 112 QVKKQEPQDTPDC 124
QVK Q Q+T D
Sbjct: 931 QVKTQVAQETSDI 943
>E5LBH0_SOLLC (tr|E5LBH0) 5'-3' exoribonuclease 4 OS=Solanum lycopersicum GN=XRN4
PE=2 SV=1
Length = 978
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 4 PRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR----SSRLPNSG 59
PRY + QN R NFR Q R +Q+Q ++++ S LT+ G R R ++R+PNSG
Sbjct: 845 PRYAPSPYEFQNTRQNFRIQDRHSYQDQYHSMRNEMSVLTIGSGARTRPPSNAARMPNSG 904
Query: 60 PINLE---PRFVQNMG-RPVPPPKWITK-APPANEMYSRHQEAASGAVPYDKQTK-VYQV 113
++ P F QN+G P PP +WI K A A M+S++QE + G YDKQ K VYQ+
Sbjct: 905 QLSNVCPPPPFTQNVGPLPSPPLQWINKPARGATAMHSKYQETSKGPA-YDKQVKQVYQI 963
Query: 114 KKQEPQDTP 122
K + Q++P
Sbjct: 964 KSRPTQESP 972
>A5B457_VITVI (tr|A5B457) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_016718 PE=4 SV=1
Length = 389
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 73/161 (45%), Gaps = 35/161 (21%)
Query: 1 MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALT----------------- 43
++ PR+P + N Q +R NFR Q RS Q+Q N + G SALT
Sbjct: 227 LSIPRFPPSPNNMQGNRQNFRVQDRSTFQDQYRNSRTGMSALTTEQNFRVQHRPPYQDQF 286
Query: 44 -----------MEEGVRPRS-----SRLPNSG-PINLEPRFVQNMGRPVPPPKWITKAPP 86
+EEGVR R SR+P++ +N +FVQN P PP KWI +
Sbjct: 287 SELSMGMSTLTIEEGVRTRQPIVRPSRMPSAADTLNTNNQFVQNKSPPAPPSKWIERQAT 346
Query: 87 ANE-MYSRHQEAASGAVPYDKQTKVYQVKKQEPQDTPDCGN 126
N M R Q+ S KVYQVK Q QD+ D G+
Sbjct: 347 GNAGMIVRQQDNVSAGTYEKPIKKVYQVKMQHLQDSSDPGS 387
>E5GBR7_CUCME (tr|E5GBR7) 5'-3' exoribonuclease OS=Cucumis melo subsp. melo PE=4
SV=1
Length = 934
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 2 ARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLPNSG-P 60
RPRY +SNG DR + R R Q EQ NV+ G SALT+EE VR RSS + G P
Sbjct: 794 GRPRYSHSSNGMPGDRQSSRGNDRVQLHEQYNNVRTGMSALTIEENVRNRSSDVLTPGPP 853
Query: 61 INLEPRFVQNMGR--------------PVPPPKWITKAPPANEMYSRHQEAASGAVPYDK 106
+ P+ + N+G P PP KWI +AP N M++R QE+ G V +
Sbjct: 854 PAMLPKML-NVGNSTNQQNFTQATDTLPSPPHKWINRAPSGNIMHARQQESFPGGVNEKQ 912
Query: 107 QTKVYQVK 114
++Y K
Sbjct: 913 VRQMYLAK 920