Miyakogusa Predicted Gene

Lj0g3v0245069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0245069.1 Non Chatacterized Hit- tr|I1LSB4|I1LSB4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.92,0.000000000003,seg,NULL,
NODE_112192_length_325_cov_9.218462.path1.1
         (52 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

I1LSB4_SOYBN (tr|I1LSB4) Uncharacterized protein OS=Glycine max ...    59   6e-07
C6T8A5_SOYBN (tr|C6T8A5) Putative uncharacterized protein OS=Gly...    59   6e-07

>I1LSB4_SOYBN (tr|I1LSB4) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 258

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 32/52 (61%)

Query: 1  MEAFDWDCGILGDAPKRISDGFEXXXXXXXXXXXXPLSLVLDRERGELVEAP 52
          ME F W  GI GDAPKR SDGFE              SLVLDRERGELVEAP
Sbjct: 3  MEDFLWGGGIAGDAPKRKSDGFEGSNGVIGSGCGSSFSLVLDRERGELVEAP 54


>C6T8A5_SOYBN (tr|C6T8A5) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 179

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 32/52 (61%)

Query: 1  MEAFDWDCGILGDAPKRISDGFEXXXXXXXXXXXXPLSLVLDRERGELVEAP 52
          ME F W  GI GDAPKR SDGFE              SLVLDRERGELVEAP
Sbjct: 3  MEDFLWGGGIAGDAPKRKSDGFEGSNGVIGSGCGSSFSLVLDRERGELVEAP 54