Miyakogusa Predicted Gene

Lj0g3v0240129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0240129.1 tr|G7JDC6|G7JDC6_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_4g023400 PE=4 SV=1,60,0.00004,
,NODE_81081_length_230_cov_21.200001.path4.1
         (42 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K7K361_SOYBN (tr|K7K361) Uncharacterized protein OS=Glycine max ...    58   1e-06

>K7K361_SOYBN (tr|K7K361) Uncharacterized protein OS=Glycine max PE=4 SV=1
          Length = 1258

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/47 (61%), Positives = 35/47 (74%), Gaps = 5/47 (10%)

Query: 1    MVVVFENGFTVKKTTVYLVYDE-----EKMEPCNAPYKNEIVFGGDE 42
            + VVFENGFTVKKTTVYL+YDE     +K+E C+A  KN +V G DE
Sbjct: 1184 VAVVFENGFTVKKTTVYLIYDEPNPNDKKLEYCHASDKNVVVSGRDE 1230