Miyakogusa Predicted Gene

Lj6g3v2007310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2007310.1 tr|B9N3I1|B9N3I1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_784298 PE=4
SV=1,31.38,0.000000007, ,CUFF.60509.1
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g08310.1                                                       225   2e-59
Glyma13g24560.1                                                       132   3e-31
Glyma07g31950.1                                                       131   4e-31

>Glyma15g08310.1 
          Length = 184

 Score =  225 bits (573), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/184 (69%), Positives = 145/184 (78%), Gaps = 4/184 (2%)

Query: 7   NKLTSHVAADNIS--MDSLSFSDLVCVQDQQPKFPSSNHAKRYQVSKHSSEFEFTTTKPN 64
           +KLTSHVA D+IS  +DSLSFS LV +QD QPK PS N AK YQVSKH SEFEFT+TK N
Sbjct: 2   DKLTSHVAYDSISYSLDSLSFSGLVAIQDHQPKLPSPNRAKDYQVSKHDSEFEFTSTKAN 61

Query: 65  LNSAVNRIKITSADQLISNGQLQPQALPFQTTQCVIINRPSSLSPLQATHISGKMPSGQT 124
           LNSAVN IKIT ADQLISNG+LQPQAL  QT Q +I N PSS S L ATH S KM   +T
Sbjct: 62  LNSAVNPIKITPADQLISNGRLQPQALAIQTNQSLIRNLPSSSSSLLATHSSSKMSCSKT 121

Query: 125 ITATKYHEKLSKSSKHTTTNKQTTVARTGFRQKMKSFLSPCRECQTIKHDAVKAQTVPGE 184
            +  KYHE+L+++SKH   NK++TV RTGF QKMKSFLSPCREC+TIK  AVKAQTVPGE
Sbjct: 122 GSNMKYHEQLNEASKH--ANKKSTVTRTGFGQKMKSFLSPCRECRTIKQGAVKAQTVPGE 179

Query: 185 KIKI 188
            +KI
Sbjct: 180 NLKI 183


>Glyma13g24560.1 
          Length = 183

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/186 (44%), Positives = 109/186 (58%), Gaps = 9/186 (4%)

Query: 1   MDTRQANKLTS---HVAADNISMDSLSFSDLVCVQDQQPKFPSSNHAKRY-QVSKHSSEF 56
           M TRQ NK +S   H A D+IS DSLSF+ LV +QDQ  K P  NH   Y +VSK   +F
Sbjct: 1   MGTRQGNKPSSKKSHAAEDSISADSLSFAGLVSIQDQNSKPPIPNHTTHYYKVSKQDLDF 60

Query: 57  EFTTTKPNLNSAVNRIKITSADQLISNGQLQPQALPFQTTQCVIINRPSSLSPLQATHIS 116
           EF+T + +LNS  N  KIT AD LISNG+++    PFQ  + V+ + P SL  L A   +
Sbjct: 61  EFSTIQEHLNSGSNPFKITPADVLISNGKIK----PFQPNRPVLTDPPISLRSLLAIDHA 116

Query: 117 GKMPSGQTITATKYHEKLSKSSKHTTTNKQTTVARTGFRQKM-KSFLSPCRECQTIKHDA 175
                     A KY E+  K+  H +  + ++V RT F  K+ +SFLSPCR+CQ  +  A
Sbjct: 117 NNSKMSNVQQARKYDEQRVKARIHKSKERSSSVTRTWFGHKVFRSFLSPCRKCQATQPGA 176

Query: 176 VKAQTV 181
           VK Q+V
Sbjct: 177 VKGQSV 182


>Glyma07g31950.1 
          Length = 179

 Score =  131 bits (330), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 13/186 (6%)

Query: 1   MDTRQANKLT--SHVAADNISMDSLSFSDLVCVQDQQPKFPSSNHAKRY-QVSKHSSEFE 57
           M TRQ NKL   SH A D+IS +SLSF+ LV +QDQ PK P  NH   Y +VS    +FE
Sbjct: 1   MGTRQGNKLPAQSHTAEDSISAESLSFACLVSIQDQNPKPPIPNHTTHYYKVSNRDLDFE 60

Query: 58  FTTTKPNLNSAVNRIKITSADQLISNGQLQPQALPFQTTQCVIINRPSSLSPLQAT-HIS 116
           F+T + +LNS  N  KI  AD LISNG+++    PFQ  + +I + P SL  L A  H++
Sbjct: 61  FSTIQEDLNSGANPFKIAPADVLISNGKIK----PFQPNRPIITDHPISLRSLLAIDHVN 116

Query: 117 GKMPSGQTITATKYHEKLSKSSKHTTTNKQTTVARTGFRQKM-KSFLSPCRECQTIKHDA 175
            KM S Q   A KY E+  K+  H  + +++ + +T F  K+ +SFLSPCR+CQ  +   
Sbjct: 117 SKMSSVQ---ARKYDEQRVKARNH-KSKERSVITKTWFGHKVFRSFLSPCRKCQATQPGV 172

Query: 176 VKAQTV 181
           +K Q+V
Sbjct: 173 IKGQSV 178