Miyakogusa Predicted Gene

Lj6g3v1786740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1786740.1 Non Chatacterized Hit- tr|I1MFM7|I1MFM7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,62.12,2e-17,seg,NULL,CUFF.59925.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g12060.1                                                        54   4e-08
Glyma09g01240.1                                                        48   3e-06

>Glyma15g12060.1 
          Length = 312

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/75 (57%), Positives = 48/75 (64%), Gaps = 6/75 (8%)

Query: 1  MARIPVRFQRMAAAFEADVARVRPCXXXXXXXXXXXXXVTDLSDLVNSFMEKNERSAG-- 58
          MARIPVRFQR+AAAF+ADVARV  C             +TDLSDLV SFMEKNE + G  
Sbjct: 1  MARIPVRFQRVAAAFDADVARVGLC--ESSGSEHSPESLTDLSDLVKSFMEKNEATTGEK 58

Query: 59 --EELVDVRREEDNE 71
            EE+ DVR   D E
Sbjct: 59 EEEEVGDVREGHDEE 73


>Glyma09g01240.1 
          Length = 282

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 2/53 (3%)

Query: 1  MARIPVRFQRMAAAFEADVARVRPCXXXXXXXXXXXXXVTDLSDLVNSFMEKN 53
          MARIPVRFQR+AAAF+ADVARVR C             +TDLSDLV SFMEKN
Sbjct: 1  MARIPVRFQRVAAAFDADVARVRLC--ESSGSEHSPESLTDLSDLVKSFMEKN 51