Miyakogusa Predicted Gene
- Lj6g3v1629870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1629870.1 Non Chatacterized Hit- tr|B9FG33|B9FG33_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.31,0.000000000000004,RNASE_3_1,Ribonuclease III domain; no
description,Ribonuclease III domain; Ribonuclease III
family,R,NODE_67609_length_564_cov_73.893616.path1.1
(167 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g02920.1 280 4e-76
Glyma09g02930.1 277 4e-75
Glyma19g44390.1 169 1e-42
Glyma19g44390.2 169 1e-42
Glyma03g42290.2 143 9e-35
Glyma03g42290.1 143 9e-35
Glyma19g45060.2 142 1e-34
Glyma19g45060.1 142 1e-34
Glyma06g06060.1 135 2e-32
Glyma04g06060.1 126 1e-29
Glyma13g22450.1 122 1e-28
Glyma17g11240.1 122 2e-28
Glyma14g02490.1 82 3e-16
Glyma18g33820.1 75 2e-14
>Glyma09g02920.1
Length = 1305
Score = 280 bits (717), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 144/163 (88%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYERHFSTCVEKLVHI 61
R L RKIIADVVEALIGAFL +GGE +ALLFMDWVGIKV FD IPYERHF EKL+++
Sbjct: 1003 RKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKVSFDKIPYERHFDIQPEKLLNV 1062
Query: 62 SLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEKYPG 121
LES+LKYSF D SLLVEALTHGSYMLPEVP CYQRLEFLGDS+LDYLIT H+Y +YPG
Sbjct: 1063 RFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNEYPG 1122
Query: 122 MSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHI 164
MSPGQLTDMRAASVNNDCYAWSAIK GLHKH+LH SQ+LHKHI
Sbjct: 1123 MSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHI 1165
>Glyma09g02930.1
Length = 1414
Score = 277 bits (708), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 127/164 (77%), Positives = 145/164 (88%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYERHFSTCVEKLVHI 61
R L++KI+ADVVEALIGAFL +GGE AALLFMDWVGIKV F+ IPY+RHF EKLV++
Sbjct: 1086 RKLRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGIKVSFNKIPYDRHFDIQPEKLVNV 1145
Query: 62 SLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEKYPG 121
S LES+L YSF D SLLVEA+THGSYMLPEVP CYQRLEFLGDS+LDYLIT H+Y KYPG
Sbjct: 1146 SFLESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNKYPG 1205
Query: 122 MSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHIT 165
M+PGQLTDMR+ASVNNDCYAWSAIK GLHKH+LH SQ+LH H++
Sbjct: 1206 MTPGQLTDMRSASVNNDCYAWSAIKHGLHKHVLHASQELHMHVS 1249
>Glyma19g44390.1
Length = 788
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 114/158 (72%), Gaps = 5/158 (3%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYE--RHFSTCV-EKL 58
R + IIADVVEALIGAF+ + E AAL F++W+GI V +I+PYE RH S E+L
Sbjct: 446 REIDLGIIADVVEALIGAFISTEDEKAALSFINWIGINVDTNIMPYENERHISIIAPEEL 505
Query: 59 VHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEK 118
V LL+S+L YSF+D LLVEALTH S PE+ TCY+RLEFLGD++LDY+IT+H Y++
Sbjct: 506 VKAKLLKSRLNYSFKDPYLLVEALTHSSGKRPEIRTCYERLEFLGDAVLDYVITMHFYKE 565
Query: 119 YPG--MSPGQLTDMRAASVNNDCYAWSAIKAGLHKHIL 154
Y S T+MR+ SVNN+CYA SAIKA L +HIL
Sbjct: 566 YSNDKFSAEFFTNMRSISVNNECYALSAIKAKLDEHIL 603
>Glyma19g44390.2
Length = 756
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 114/158 (72%), Gaps = 5/158 (3%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYE--RHFSTCV-EKL 58
R + IIADVVEALIGAF+ + E AAL F++W+GI V +I+PYE RH S E+L
Sbjct: 446 REIDLGIIADVVEALIGAFISTEDEKAALSFINWIGINVDTNIMPYENERHISIIAPEEL 505
Query: 59 VHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEK 118
V LL+S+L YSF+D LLVEALTH S PE+ TCY+RLEFLGD++LDY+IT+H Y++
Sbjct: 506 VKAKLLKSRLNYSFKDPYLLVEALTHSSGKRPEIRTCYERLEFLGDAVLDYVITMHFYKE 565
Query: 119 YPG--MSPGQLTDMRAASVNNDCYAWSAIKAGLHKHIL 154
Y S T+MR+ SVNN+CYA SAIKA L +HIL
Sbjct: 566 YSNDKFSAEFFTNMRSISVNNECYALSAIKAKLDEHIL 603
>Glyma03g42290.2
Length = 1913
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYE---RHFST--CVE 56
R L K +ADVVEALIG + + GG+NAA M W+GI++ FD E + F+ +
Sbjct: 1512 RVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQIEFDPDTMECTKKPFNVPDSIL 1571
Query: 57 KLVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMY 116
+ V LE L F D LLVE++TH S V +CYQRLEF+GD++LD+LIT H++
Sbjct: 1572 RSVDFDALEGALNMKFNDRGLLVESITHASRPSSGV-SCYQRLEFVGDAVLDHLITRHLF 1630
Query: 117 EKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
Y + PG+LTD+RAA+VNN+ +A A+K LH H+ H S L K I E
Sbjct: 1631 FTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKE 1680
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 95 CYQRLEFLGDSILDYLITVHMYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHI 153
CY+R E LGD+ L ++++ ++ KYP GQLT MR V+N A+ GL +I
Sbjct: 1387 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYI 1445
>Glyma03g42290.1
Length = 1913
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 106/170 (62%), Gaps = 6/170 (3%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYE---RHFST--CVE 56
R L K +ADVVEALIG + + GG+NAA M W+GI++ FD E + F+ +
Sbjct: 1512 RVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQIEFDPDTMECTKKPFNVPDSIL 1571
Query: 57 KLVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMY 116
+ V LE L F D LLVE++TH S V +CYQRLEF+GD++LD+LIT H++
Sbjct: 1572 RSVDFDALEGALNMKFNDRGLLVESITHASRPSSGV-SCYQRLEFVGDAVLDHLITRHLF 1630
Query: 117 EKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
Y + PG+LTD+RAA+VNN+ +A A+K LH H+ H S L K I E
Sbjct: 1631 FTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKE 1680
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 95 CYQRLEFLGDSILDYLITVHMYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHI 153
CY+R E LGD+ L ++++ ++ KYP GQLT MR V+N A+ GL +I
Sbjct: 1387 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYI 1445
>Glyma19g45060.2
Length = 1902
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDI-------IPYERHFSTC 54
R L K +ADVVEALIG + + GG+NAA M W+GI++ FD P+ +
Sbjct: 1501 RVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWMGIQIEFDPDTMDCTRKPF--NVPDS 1558
Query: 55 VEKLVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVH 114
+ + V LE L F+D LLVE++TH S V +CYQRLEF+GD++LD+LIT H
Sbjct: 1559 ILRSVDFDALEGALNMKFKDRGLLVESITHASRPSSGV-SCYQRLEFVGDAVLDHLITRH 1617
Query: 115 MYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
++ Y + PG+LTD+RAA+VNN+ +A A+K LH H+ H S L K I E
Sbjct: 1618 LFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKE 1669
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 55 VEKLVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVH 114
VE ++ L++ + Y + S +L EALT S + CY+R E LGD+ L ++++
Sbjct: 1340 VESMLLAVQLKNMINYPVQASKIL-EALTAASC---QETFCYERAELLGDAYLKWVVSRF 1395
Query: 115 MYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHI 153
++ KYP GQLT MR V+N A+ GL +I
Sbjct: 1396 LFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYI 1434
>Glyma19g45060.1
Length = 1902
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 2 RNLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDI-------IPYERHFSTC 54
R L K +ADVVEALIG + + GG+NAA M W+GI++ FD P+ +
Sbjct: 1501 RVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWMGIQIEFDPDTMDCTRKPF--NVPDS 1558
Query: 55 VEKLVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVH 114
+ + V LE L F+D LLVE++TH S V +CYQRLEF+GD++LD+LIT H
Sbjct: 1559 ILRSVDFDALEGALNMKFKDRGLLVESITHASRPSSGV-SCYQRLEFVGDAVLDHLITRH 1617
Query: 115 MYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
++ Y + PG+LTD+RAA+VNN+ +A A+K LH H+ H S L K I E
Sbjct: 1618 LFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKE 1669
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 55 VEKLVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVH 114
VE ++ L++ + Y + S +L EALT S + CY+R E LGD+ L ++++
Sbjct: 1340 VESMLLAVQLKNMINYPVQASKIL-EALTAASC---QETFCYERAELLGDAYLKWVVSRF 1395
Query: 115 MYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHI 153
++ KYP GQLT MR V+N A+ GL +I
Sbjct: 1396 LFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYI 1434
>Glyma06g06060.1
Length = 468
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 102/165 (61%), Gaps = 5/165 (3%)
Query: 7 KIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYER-----HFSTCVEKLVHI 61
K IAD VEALIGA+ + GG A+L M W+GI V ++ + STCV I
Sbjct: 190 KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLDEAITAASLSTCVPIESDI 249
Query: 62 SLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEKYPG 121
+ LE K++Y F LL+EA+TH S + CY+RL+FLGDS+LD LIT H+Y+ +
Sbjct: 250 ASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLYQSHTD 309
Query: 122 MSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
+ PG L D+R+ASVNND +A A++ LH+H+LH S L I E
Sbjct: 310 IDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILE 354
>Glyma04g06060.1
Length = 1530
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 5/165 (3%)
Query: 7 KIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYERHFS-----TCVEKLVHI 61
K IAD VEALIGA+ + GG A+L M W+GI ++ + + TC+ K I
Sbjct: 1069 KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGAELELSLVDEAITAASLRTCLPKESEI 1128
Query: 62 SLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEKYPG 121
+ LE K+ Y F LL+EA+TH S + CY+RLEFLGDS+LD LIT H+Y+ +
Sbjct: 1129 ASLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYQSHTD 1188
Query: 122 MSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
+ PG LTD+R+ASVNND +A A++ LH+H+LH S L I+E
Sbjct: 1189 IDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLLSQISE 1233
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 69 KYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHMYEKYPGMSPGQLT 128
K++ R SSL++E+LT + +RLE LGDS+L Y+++ H++ KYP GQL+
Sbjct: 928 KFNIR-SSLILESLT---TLRCSESFSMERLELLGDSVLKYVVSCHLFLKYPKKHEGQLS 983
Query: 129 DMRAASVNN 137
R+++V N
Sbjct: 984 ARRSSAVCN 992
>Glyma13g22450.1
Length = 1394
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 4 LKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCF------DIIPYERHFSTCVEK 57
L RK IADVVEAL+GAFL+ G AA+ F+ W+GI+V F DI +S +
Sbjct: 1087 LHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVVDICIASASYSP-LSS 1145
Query: 58 LVHISLLESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQ--RLEFLGDSILDYLITVHM 115
V I LE KL + F LL++A H SY CYQ RLEFLGD++LDYLIT ++
Sbjct: 1146 EVDIPSLEGKLGHHFFHKGLLLQAFVHPSYN-KLGGGCYQASRLEFLGDAVLDYLITSYL 1204
Query: 116 YEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
+ YP + PGQLTD+R+ SVNN +A A+ +L S L + I +
Sbjct: 1205 FSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDNFLLCDSSGLSEAIKK 1255
>Glyma17g11240.1
Length = 1679
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 4 LKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYERHFSTCVEKLVHISL 63
L RK IADVVEAL+GAFL+ G AA+ F+ W+GI+V F+ + C+ ++ L
Sbjct: 1241 LHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEA---SQVVDICIASASYLPL 1297
Query: 64 --------LESKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQ--RLEFLGDSILDYLITV 113
LE KL + F LL++A H SY CYQ RLEFLGD++LDYLIT
Sbjct: 1298 SSEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYN-KLGGGCYQASRLEFLGDAVLDYLITS 1356
Query: 114 HMYEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
+++ YP + PGQLTD+R+ SVNN +A A+ K +L S L + I +
Sbjct: 1357 YVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKFLLCDSSGLSEAIKK 1409
>Glyma14g02490.1
Length = 345
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 6/105 (5%)
Query: 59 VHISLLE---SKLKYSFRDSSLLVEALTHGSYMLPEVPTCYQRLEFLGDSILDYLITVHM 115
+ +SLLE + L+Y FR+ LL EALTH S++ Y+RLEF+GD +L I+ ++
Sbjct: 1 MEVSLLEEVENILRYRFRNKKLLEEALTHSSFL---DGVSYERLEFVGDPVLSLAISNYL 57
Query: 116 YEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDL 160
+ YP + PGQL+ +RAA+V+ + A A++ GLH+ + H + L
Sbjct: 58 FLAYPDLDPGQLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPL 102
>Glyma18g33820.1
Length = 383
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 38/171 (22%)
Query: 3 NLKRKIIADVVEALIGAFLISGGENAALLFMDWVGIKVCFDIIPYERHFS-----TCVEK 57
L K IAD +EALIGA+ + GG AAL M W+G+ V D + + V K
Sbjct: 145 GLCSKTIADCIEALIGAYYVGGGLTAALHVMQWLGMNVGHDSPLVHEAITRTLLRSNVPK 204
Query: 58 LVHISLLESKLKYSFRDSSLLVEALTHGSY--MLPEVPTCYQRLEFLGDSILDYLITVHM 115
+I+ LE KL Y F LL+EA+TH S + P + CYQRLEFL
Sbjct: 205 AYYINSLELKLGYEFSTKGLLLEAMTHPSQQELEPGICYCYQRLEFL------------- 251
Query: 116 YEKYPGMSPGQLTDMRAASVNNDCYAWSAIKAGLHKHILHVSQDLHKHITE 166
+V+N+ +A IK L H+ + S+ L +T+
Sbjct: 252 ------------------AVSNENFAQCCIKRNLQPHLQYCSRILQSRVTK 284