Miyakogusa Predicted Gene

Lj6g3v1078040.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078040.2 tr|G7ID06|G7ID06_MEDTR Serine decarboxylase
OS=Medicago truncatula GN=MTR_1g099050 PE=3
SV=1,64.76,0,Pyridoxal_deC,Pyridoxal phosphate-dependent
decarboxylase; PLP-dependent transferases,Pyridoxal phos,CUFF.59027.2
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g37180.1                                                       339   3e-93
Glyma08g08130.1                                                       333   1e-91
Glyma08g19360.1                                                       324   9e-89
Glyma15g05630.2                                                       321   6e-88
Glyma15g05630.1                                                       321   6e-88
Glyma10g37050.1                                                       310   1e-84
Glyma20g30570.1                                                       248   8e-66
Glyma20g30470.1                                                       196   3e-50
Glyma10g37060.1                                                       179   4e-45
Glyma11g25640.1                                                       103   3e-22
Glyma18g52750.1                                                        86   5e-17
Glyma20g30560.1                                                        74   2e-13

>Glyma10g37180.1 
          Length = 371

 Score =  339 bits (869), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 154/228 (67%), Positives = 183/228 (80%)

Query: 80  GFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYGQNSVEFEVCVLDWFAKLWQMEKGDYW 139
           G+P NQ+F+YDAL PLLH+HLNN  DPF  S +  NS +FEVCVLDWFA LW+++KG+YW
Sbjct: 1   GYPTNQDFDYDALAPLLHFHLNNVGDPFTESSFSLNSSKFEVCVLDWFANLWEIDKGEYW 60

Query: 140 GYVTTGGTEGNLHGILMGREKFQDGILYTSENSHYSLFKIARMYRMQCVKINTLVSGGIX 199
           GYVTTGGTEGNLHGIL GRE+F DGILYTS++SHYS+FK ARMYRMQCV + TLVSG I 
Sbjct: 61  GYVTTGGTEGNLHGILTGREQFPDGILYTSQDSHYSIFKAARMYRMQCVTVGTLVSGEID 120

Query: 200 XXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNIDLVIETLEECGFPQDRFYIHCDGALSG 259
                           IINLNIGT MKGAID+IDLV++TLE  GF  D+FYIHCDGAL G
Sbjct: 121 CVDLKALLLAHKDKPAIINLNIGTTMKGAIDDIDLVVQTLEGSGFSCDQFYIHCDGALFG 180

Query: 260 IMLPFLKRAPRINFKKPIGSISISGHKFLGCPIPCGVILTRSEHVNAL 307
           +M+PFL +AP++ FKKPIGSI+ISGHKFLGCP PCGV++TR E++N L
Sbjct: 181 MMMPFLIQAPKVTFKKPIGSITISGHKFLGCPFPCGVLITRLEYINTL 228


>Glyma08g08130.1 
          Length = 485

 Score =  333 bits (855), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 155/254 (61%), Positives = 193/254 (75%)

Query: 54  GESRTNLSKTIAKYVVKLNQNKSQCLGFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYG 113
           GE    ++  +AKY   L +  +  LG+P N  F+YDAL+ L H+ +NN  DPF+ S YG
Sbjct: 84  GEREAYMAGVLAKYKKSLTERTNYHLGYPYNLNFDYDALSQLQHFSINNLGDPFIESNYG 143

Query: 114 QNSVEFEVCVLDWFAKLWQMEKGDYWGYVTTGGTEGNLHGILMGREKFQDGILYTSENSH 173
            +S +FEV VLDWFA+LW++EK +YWGY+T  GTEGNLHGIL+GRE F DGILY S+ SH
Sbjct: 144 VHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASQESH 203

Query: 174 YSLFKIARMYRMQCVKINTLVSGGIXXXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNID 233
           YS+FK ARMYRM+CVKINTL SG I                 I+N+NIGT +KGA+D++D
Sbjct: 204 YSVFKAARMYRMECVKINTLWSGEIDCDDFKAKLLCHKDKPAIVNVNIGTTVKGAVDDLD 263

Query: 234 LVIETLEECGFPQDRFYIHCDGALSGIMLPFLKRAPRINFKKPIGSISISGHKFLGCPIP 293
           LVI+ LEE GF QDRFYIHCDGAL G+MLPF+KRAP+I+FKKPIGS+S+SGHKF+GCP+P
Sbjct: 264 LVIKKLEEAGFSQDRFYIHCDGALFGLMLPFVKRAPKISFKKPIGSVSVSGHKFVGCPMP 323

Query: 294 CGVILTRSEHVNAL 307
           CGV +TR EHVNAL
Sbjct: 324 CGVQITRLEHVNAL 337


>Glyma08g19360.1 
          Length = 483

 Score =  324 bits (830), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 146/254 (57%), Positives = 189/254 (74%)

Query: 54  GESRTNLSKTIAKYVVKLNQNKSQCLGFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYG 113
           G+   +++  +A+Y   L +     LG+P N +F+Y ALT L H+ +NN  DPF+ S YG
Sbjct: 82  GDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALTQLQHFSINNLGDPFIESNYG 141

Query: 114 QNSVEFEVCVLDWFAKLWQMEKGDYWGYVTTGGTEGNLHGILMGREKFQDGILYTSENSH 173
            +S +FEV VLDWFA+LW++EK +YWGY+T  GTEGNLHGIL+GRE F DGILY S  SH
Sbjct: 142 VHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH 201

Query: 174 YSLFKIARMYRMQCVKINTLVSGGIXXXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNID 233
           YS+FK ARMYRM+C K++TL SG I                 IIN+NIGT +KGA+D++D
Sbjct: 202 YSVFKAARMYRMECEKVDTLWSGEIDCDDFKAKLLSHQDKPAIINVNIGTTVKGAVDDLD 261

Query: 234 LVIETLEECGFPQDRFYIHCDGALSGIMLPFLKRAPRINFKKPIGSISISGHKFLGCPIP 293
           LVI+ LEE GF  DRFYIHCDGAL G+M+PF+KRAP++ FKKP+GS+S+SGHKF+GCP+P
Sbjct: 262 LVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPVGSVSVSGHKFVGCPMP 321

Query: 294 CGVILTRSEHVNAL 307
           CGV +TR E+VNAL
Sbjct: 322 CGVQITRLEYVNAL 335


>Glyma15g05630.2 
          Length = 485

 Score =  321 bits (823), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 146/254 (57%), Positives = 188/254 (74%)

Query: 54  GESRTNLSKTIAKYVVKLNQNKSQCLGFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYG 113
           G+   +++  +A+Y   L +     LG+P N +F+Y ALT L H+ +NN  DPF+ S YG
Sbjct: 84  GDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALTQLQHFSINNLGDPFIESNYG 143

Query: 114 QNSVEFEVCVLDWFAKLWQMEKGDYWGYVTTGGTEGNLHGILMGREKFQDGILYTSENSH 173
            +S +FEV VLDWFA+LW++EK +YWGY+T  GTEGNLHGIL+GRE F DGILY S  SH
Sbjct: 144 VHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH 203

Query: 174 YSLFKIARMYRMQCVKINTLVSGGIXXXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNID 233
           YS+FK ARMYRM+C K++TL SG I                 IIN+NIGT +KGA+D++D
Sbjct: 204 YSVFKAARMYRMECEKVDTLWSGEIDCDDFKAKLLSHQDKPAIINVNIGTTVKGAVDDLD 263

Query: 234 LVIETLEECGFPQDRFYIHCDGALSGIMLPFLKRAPRINFKKPIGSISISGHKFLGCPIP 293
           LVI+ LEE GF  DRFYIHCDGAL G+M+PF+K AP++ FKKPIGS+S+SGHKF+GCP+P
Sbjct: 264 LVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKLAPKVTFKKPIGSVSVSGHKFVGCPMP 323

Query: 294 CGVILTRSEHVNAL 307
           CGV +TR E+VNAL
Sbjct: 324 CGVQITRLEYVNAL 337


>Glyma15g05630.1 
          Length = 485

 Score =  321 bits (823), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 146/254 (57%), Positives = 188/254 (74%)

Query: 54  GESRTNLSKTIAKYVVKLNQNKSQCLGFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYG 113
           G+   +++  +A+Y   L +     LG+P N +F+Y ALT L H+ +NN  DPF+ S YG
Sbjct: 84  GDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALTQLQHFSINNLGDPFIESNYG 143

Query: 114 QNSVEFEVCVLDWFAKLWQMEKGDYWGYVTTGGTEGNLHGILMGREKFQDGILYTSENSH 173
            +S +FEV VLDWFA+LW++EK +YWGY+T  GTEGNLHGIL+GRE F DGILY S  SH
Sbjct: 144 VHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH 203

Query: 174 YSLFKIARMYRMQCVKINTLVSGGIXXXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNID 233
           YS+FK ARMYRM+C K++TL SG I                 IIN+NIGT +KGA+D++D
Sbjct: 204 YSVFKAARMYRMECEKVDTLWSGEIDCDDFKAKLLSHQDKPAIINVNIGTTVKGAVDDLD 263

Query: 234 LVIETLEECGFPQDRFYIHCDGALSGIMLPFLKRAPRINFKKPIGSISISGHKFLGCPIP 293
           LVI+ LEE GF  DRFYIHCDGAL G+M+PF+K AP++ FKKPIGS+S+SGHKF+GCP+P
Sbjct: 264 LVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKLAPKVTFKKPIGSVSVSGHKFVGCPMP 323

Query: 294 CGVILTRSEHVNAL 307
           CGV +TR E+VNAL
Sbjct: 324 CGVQITRLEYVNAL 337


>Glyma10g37050.1 
          Length = 339

 Score =  310 bits (795), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 143/227 (62%), Positives = 175/227 (77%), Gaps = 17/227 (7%)

Query: 81  FPVNQEFNYDALTPLLHYHLNNASDPFLGSGYGQNSVEFEVCVLDWFAKLWQMEKGDYWG 140
           +P NQ+FN DA+ PL H+H NNA                 VCVL+WF  LW+++K +YWG
Sbjct: 1   YPTNQDFNSDAIKPLFHFHPNNA-----------------VCVLNWFTNLWEIKKNEYWG 43

Query: 141 YVTTGGTEGNLHGILMGREKFQDGILYTSENSHYSLFKIARMYRMQCVKINTLVSGGIXX 200
           YVTTGGTEGNLHGIL+GRE+  DGILYTS++SHYS+FKIARMYRM+C+K++TL SG I  
Sbjct: 44  YVTTGGTEGNLHGILVGREQLPDGILYTSQDSHYSIFKIARMYRMKCMKVSTLTSGEIDC 103

Query: 201 XXXXXXXXXXXXXXXIINLNIGTIMKGAIDNIDLVIETLEECGFPQDRFYIHCDGALSGI 260
                          IINLNIGT MKGAID++DLVI+TLEECGF +DRFYIHCDGAL G+
Sbjct: 104 VNLKDLVLTHKDKPAIINLNIGTTMKGAIDDLDLVIQTLEECGFTRDRFYIHCDGALFGM 163

Query: 261 MLPFLKRAPRINFKKPIGSISISGHKFLGCPIPCGVILTRSEHVNAL 307
           MLPF+K+APRI FKKPIGS+++SGHKFLGCPIPCG+ +TR E++NAL
Sbjct: 164 MLPFVKQAPRITFKKPIGSVTVSGHKFLGCPIPCGIAITRLEYINAL 210


>Glyma20g30570.1 
          Length = 407

 Score =  248 bits (632), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 162/248 (65%), Gaps = 23/248 (9%)

Query: 32  TEKNWEIQENEGHMNLNITKCFGESRTNLSKTIAKYVVKLNQNKSQCLGFPVNQEFNYDA 91
           T +  + + N  HMNL IT+C G+++ NL+   A  V  LNQ     LG+P N++FN DA
Sbjct: 23  TTRREKYENNNSHMNLAITQCSGDTQANLASATAYCVETLNQYSLCNLGYPTNRDFNCDA 82

Query: 92  LTPLLHYHLNNASDPFLGSGYGQNS-----------VEFEVCVLDWFAKLWQMEKGDYWG 140
           + PLLH+HLNNA    +G G+   S           +   VCVL+WFA LW+++K +YW 
Sbjct: 83  IKPLLHFHLNNAD---IGHGHVDTSHFEKVNEMLIYLSVSVCVLNWFANLWEIKKNEYWR 139

Query: 141 YVTTGGTEGNLHGILMGREKFQDGILYTSENSHYSLFKIARMYRMQCVKINTLVSGGIXX 200
           Y TTGGTEGNLHGIL+GRE+ +DGILYTS++SHYS+FKIAR+          L SG I  
Sbjct: 140 YATTGGTEGNLHGILVGREQLRDGILYTSQDSHYSIFKIARI---------KLTSGEIDC 190

Query: 201 XXXXXXXXXXXXXXXIINLNIGTIMKGAIDNIDLVIETLEECGFPQDRFYIHCDGALSGI 260
                          IINLNIGT MKGAID++DLVI+TLE CGF +DRFYIHCDGAL G+
Sbjct: 191 ANLRNLVLAHKDKPAIINLNIGTTMKGAIDDLDLVIQTLEGCGFTRDRFYIHCDGALFGM 250

Query: 261 MLPFLKRA 268
           MLPF+K+ 
Sbjct: 251 MLPFVKQV 258


>Glyma20g30470.1 
          Length = 117

 Score =  196 bits (497), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 88/117 (75%), Positives = 101/117 (86%)

Query: 80  GFPVNQEFNYDALTPLLHYHLNNASDPFLGSGYGQNSVEFEVCVLDWFAKLWQMEKGDYW 139
           G+P NQ+F YDAL PL H +LNNA DPF+GS Y  NS +FEVCVLDWFA LW+++KG+YW
Sbjct: 1   GYPTNQDFGYDALAPLCHSNLNNACDPFIGSSYNLNSSKFEVCVLDWFANLWEIDKGEYW 60

Query: 140 GYVTTGGTEGNLHGILMGREKFQDGILYTSENSHYSLFKIARMYRMQCVKINTLVSG 196
           GYVTTGGTEGNLHGIL GRE F DGILYTS++SHYS+FKIARMYRMQCV + TLVSG
Sbjct: 61  GYVTTGGTEGNLHGILTGREIFPDGILYTSQDSHYSIFKIARMYRMQCVTVGTLVSG 117


>Glyma10g37060.1 
          Length = 279

 Score =  179 bits (454), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 80/126 (63%), Positives = 101/126 (80%)

Query: 182 MYRMQCVKINTLVSGGIXXXXXXXXXXXXXXXXXIINLNIGTIMKGAIDNIDLVIETLEE 241
           MYRMQC+K++TLVSG I                 IINLNIGT MKG +D++DLVI+TL+E
Sbjct: 1   MYRMQCMKVSTLVSGEINCVDLKALLLAHKDKPAIINLNIGTTMKGGVDDLDLVIQTLQE 60

Query: 242 CGFPQDRFYIHCDGALSGIMLPFLKRAPRINFKKPIGSISISGHKFLGCPIPCGVILTRS 301
           CGF +DRFYIHCDGAL G+MLPF+++APRI F+KPIGS++ISGHKFLGCPIPCG+++TR 
Sbjct: 61  CGFTRDRFYIHCDGALFGMMLPFVEQAPRITFEKPIGSVAISGHKFLGCPIPCGIVITRL 120

Query: 302 EHVNAL 307
            ++NAL
Sbjct: 121 RYINAL 126


>Glyma11g25640.1 
          Length = 205

 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 58/72 (80%)

Query: 87  FNYDALTPLLHYHLNNASDPFLGSGYGQNSVEFEVCVLDWFAKLWQMEKGDYWGYVTTGG 146
           F+YDAL+ L H+ +NN  DPF+ S YG +S +FEV VLDWFA LW++EK +YWGY+T  G
Sbjct: 2   FDYDALSQLQHFSINNPGDPFIESNYGVHSRQFEVGVLDWFAWLWELEKDEYWGYITNYG 61

Query: 147 TEGNLHGILMGR 158
           TEGNLHGIL+G+
Sbjct: 62  TEGNLHGILVGK 73


>Glyma18g52750.1 
          Length = 172

 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 62/117 (52%), Gaps = 30/117 (25%)

Query: 148 EGNLHGILMGREKFQDGILYTSENSHYSLFKIARMYRMQCVKINTLVSGGIXXXXXXXXX 207
           +GNLHGIL+GRE                              INTL SG I         
Sbjct: 86  KGNLHGILVGRE------------------------------INTLWSGEIDCDGFEAKL 115

Query: 208 XXXXXXXXIINLNIGTIMKGAIDNIDLVIETLEECGFPQDRFYIHCDGALSGIMLPF 264
                   I+N+NIGT +KGA+D++DLVI+ LEE GF +DRFYIHCDGAL G+ML F
Sbjct: 116 LCHKDKPAIVNVNIGTTVKGAMDDLDLVIKKLEEAGFSRDRFYIHCDGALFGLMLSF 172


>Glyma20g30560.1 
          Length = 150

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 36/40 (90%)

Query: 268 APRINFKKPIGSISISGHKFLGCPIPCGVILTRSEHVNAL 307
           A RI F KPIGSI+I GHKFLGCPIPCGV++TRSE++NAL
Sbjct: 1   ASRITFNKPIGSITICGHKFLGCPIPCGVVITRSEYINAL 40