Miyakogusa Predicted Gene

Lj5g3v2242480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2242480.1 Non Chatacterized Hit- tr|I1NFA2|I1NFA2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,35.29,3e-16,B3,B3 DNA binding domain; no description,DNA-binding
pseudobarrel domain; DNA-binding pseudobarrel d,CUFF.57028.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g24220.1                                                        90   2e-18
Glyma10g42780.1                                                        84   1e-16
Glyma20g24210.1                                                        83   2e-16
Glyma10g42790.1                                                        78   4e-15
Glyma10g42770.1                                                        77   1e-14
Glyma01g11670.1                                                        58   8e-09
Glyma09g20280.1                                                        57   2e-08
Glyma09g20060.1                                                        56   2e-08
Glyma08g44650.1                                                        55   5e-08
Glyma07g19380.1                                                        54   1e-07
Glyma13g05930.1                                                        53   2e-07
Glyma20g24270.1                                                        51   8e-07
Glyma20g24230.1                                                        49   2e-06

>Glyma20g24220.1 
          Length = 246

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 36/170 (21%)

Query: 1   MPRKLVSKHWDGISNPISLLL-PGATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +PR  V+K W+G+SNP+ LLL  GA W+V+W+K   DV ++ D+WK FA    LD +HLL
Sbjct: 2   IPRSFVNKCWEGMSNPVVLLLRNGAEWKVKWKKLDVDVWLI-DDWKEFADFCCLDQDHLL 60

Query: 60  RFSFRHDSHVRRTQFHVEI-HESGMEIDHYPFKQGSADSGEESDKSTDDENENEKEVHVS 118
            F      ++ +++F V I +++G+E+  YP  + + D                     +
Sbjct: 61  VFK-----YMGKSRFQVVIFYQNGLEM-QYPLMEETIDG--------------------N 94

Query: 119 SRHQKKRPKSPLPVSRSPKKVKTNSKEGKVSYHKQQTRTESGRVKLENNK 168
           S  Q KR KSPLP S S KKVKTN +       K+ +R    R+   N++
Sbjct: 95  SLCQPKRAKSPLPFSSSIKKVKTNPR-------KEPSRGRRRRIMCSNSR 137


>Glyma10g42780.1 
          Length = 171

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 10/107 (9%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +PR  V+K W+GISNP+ L+LP GA W+V W++   DV ++ DEWK FA   SLD +HL+
Sbjct: 24  IPRSFVNKCWEGISNPVVLVLPNGAEWKVNWKRLDLDVWLI-DEWKKFAQVLSLDKDHLM 82

Query: 60  RFSFRHDSHVRRTQFHVEI-HESGMEIDHYPFKQGSADSGEESDKST 105
            F      +V  +QF V I  +SG+E+  YP    + D GEE+D  T
Sbjct: 83  VF-----RYVGNSQFQVVILDQSGLEVG-YPLINATLD-GEETDVET 122


>Glyma20g24210.1 
          Length = 249

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 9/102 (8%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +PR  V+K W+GISNP+ LLLP G  W+V+W+K   D++++ D WK FA   SLD +HLL
Sbjct: 14  IPRSFVNKCWEGISNPVLLLLPNGVEWKVKWKKLDADILLIED-WKEFAEFCSLDKDHLL 72

Query: 60  RFSFRHDSHVRRTQFHVEIH-ESGMEIDHYPFKQGSADSGEE 100
            F      ++R++QF V I  ++G+E++ YP   G+ D  E+
Sbjct: 73  VF-----EYLRKSQFLVVIFDQNGLEME-YPLMGGTLDGDEK 108


>Glyma10g42790.1 
          Length = 155

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +PR  V+K+W+GISNP+ LLLP GA W V+W+K   D I L DEWK FA   SLD EHLL
Sbjct: 14  IPRSFVNKYWEGISNPVLLLLPKGAEWNVKWKKLDAD-IWLIDEWKKFAEFCSLDQEHLL 72

Query: 60  RFSFRHDSHVRRTQFH---VEIHESGMEIDHYPFKQGSADSGEESDKSTDDENENEKEVH 116
            F +   S  +   F    +E+    +E  +YP    S D   E  +S     E  K  H
Sbjct: 73  VFKYVGKSRFQVVTFDQNGLEMQYPLIEPANYP----SHDVKTEPAQSQRANVELSKNFH 128


>Glyma10g42770.1 
          Length = 277

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 23/157 (14%)

Query: 38  IMLGDEWKNFAMHYSLDVEHLLRFSFRHDSHVRRTQFHVEI-HESGMEIDHYPFKQGSAD 96
           + L D+WK FA  YSLD++HLL F +     V R++F V I  +SG+E+  YP  + + D
Sbjct: 12  VWLIDDWKKFAEAYSLDLDHLLVFKY-----VGRSEFQVVILDQSGLEMS-YPLTEATLD 65

Query: 97  SGEESDKSTDDENENEKEVHVSSRHQKKRPKSPLPVSRSPKKVKTNSKEGKVSYHKQQTR 156
            GE++  S                 Q KR  SPLP S S KKVKTN+++   +Y  Q   
Sbjct: 66  -GEDNGNSLP---------------QSKRASSPLPFSPSTKKVKTNTRKETNAYPLQDED 109

Query: 157 TESGRVKLENNKLKNTGQKQMSHGRGECSKSASIESE 193
            E+   + + NK K  G +++ +     SKS +I++E
Sbjct: 110 VETKCAQSKRNKAKKRGGRRVMYANRRFSKSKAIQNE 146


>Glyma01g11670.1 
          Length = 213

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 11/112 (9%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +P K V K+ +G+ N + L  P GA W++  EKR  D +     W+ FA H+SLD  HLL
Sbjct: 14  LPNKFVEKYGEGLPNTLFLKAPNGAEWKLTLEKRD-DKMWFQKGWREFAKHHSLDHGHLL 72

Query: 60  RFSFRHDSHVRRTQFHVEIHE-SGMEIDHYPFK--QGSADSGEESDKSTDDE 108
            F ++  SH     F V I + SG+EI+ YP    +G   S  + +K  + E
Sbjct: 73  LFRYQRTSH-----FQVHIFDGSGLEIE-YPLGKVEGKMTSNYQKNKRPNGE 118


>Glyma09g20280.1 
          Length = 197

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 14/151 (9%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +P K   ++   +SNP+ L  P G  W++ W K   D I     WK FA +YSL  ++L+
Sbjct: 2   IPNKFTREYGVNLSNPVFLKPPDGIEWKIFWTKHDGD-IWFQKGWKEFATYYSLSHKYLV 60

Query: 60  RFSFRHDSHVR-----RTQFHVEIHESGMEIDHYPFKQGSADSGEESDKSTDDENENEKE 114
            F ++  SH+      ++   V+    G++I+H      S DS E SD S +  +E    
Sbjct: 61  LFKYQETSHLEVHIFDQSALEVDYPFCGIKIEHENLDHVSNDSVEVSDDSIEVLDE---- 116

Query: 115 VHVSSRHQKKRPKSPLPVSRSPKKVKTNSKE 145
             ++   +K R KS    SR  KK+ T   E
Sbjct: 117 --LTPSQKKTRLKST-SCSRPRKKLNTGPSE 144


>Glyma09g20060.1 
          Length = 289

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 12/113 (10%)

Query: 1   MPRKLVSKHWDGISNPISLLLP--GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHL 58
           +P+K   K+ DG+SNP+  L P  G  W++ + K G + I     WK FA +YSLD  HL
Sbjct: 31  LPKKFTRKYGDGMSNPV-FLKPADGTEWKIHYTKHGGE-IWFQKGWKEFATYYSLDHGHL 88

Query: 59  LRFSFRHDSHVRRTQFHVEIHE-SGMEIDHYPFKQGSADSGEESDKSTDDENE 110
           L F +   SH     F V I + S +EID YP   G+ +  +   + +DD  E
Sbjct: 89  LFFEYEGTSH-----FDVHIFDSSALEID-YP-SHGTHEGKDNLVEISDDSVE 134


>Glyma08g44650.1 
          Length = 271

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 14/118 (11%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +P K V K+ + +SN + L LP G  W+V  EKR   V    + WK+FA +YSL   HLL
Sbjct: 6   LPEKFVRKYGNHLSNSMLLKLPNGIEWKVNLEKRDGSV-WFQEGWKDFAEYYSLANGHLL 64

Query: 60  RFSFRHDSHVRRTQFHVEIHE-SGMEIDHYPF-----KQGSADSGEESDKSTDDENEN 111
            F +   SH     FHV I + S MEI+ YP      K+ S +S E     T   +EN
Sbjct: 65  GFRYDGTSH-----FHVFICDMSTMEIE-YPVNKANHKRPSINSEESQPHKTQKTDEN 116


>Glyma07g19380.1 
          Length = 211

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 12/110 (10%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +P     +HW GISNP+ L LP G   +V W K G DV    + W+ FA    LDV H +
Sbjct: 2   VPSSFTRRHWQGISNPVILSLPNGTKRKVYWLKDGCDV-WFSNGWREFAKKLRLDVSHFV 60

Query: 60  RFSFRHDSHVRRTQFHVEIH-ESGMEIDHYPFKQGSADSGEESDKSTDDE 108
            F +  +S      F+V I  +S +E++ YP    S DS  E ++  D +
Sbjct: 61  VFRYEGNS-----CFNVIIFGKSALEVE-YP---SSHDSNVEVEEINDTD 101


>Glyma13g05930.1 
          Length = 117

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +P+   +K+ D +SN + L  P G  W++ W K     I     WK +A +YSLD  HLL
Sbjct: 1   LPKDFTTKYGDSMSNLVFLNPPDGIEWKICWTKLD-GKIWFEKGWKEYATYYSLDHGHLL 59

Query: 60  RFSFRHDSHVRRTQFHVEIHE-SGMEIDHYPFKQGSADSGEESDKSTDDENE 110
            F ++  SH     F V I + S +E+D YP   G+ D  E   + +DD  E
Sbjct: 60  LFQYQGTSH-----FDVHIFDNSAIEVD-YPSSPGTRDGKERHVEISDDSVE 105


>Glyma20g24270.1 
          Length = 254

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 1  MPRKLVSKHWDGISNPISL-LLPGATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
          +P K  SK+  G+ NP+ +  L G  W+V W K+  +V      WK F  HYSLD  HL+
Sbjct: 2  IPNKFTSKYGGGLPNPVFIKPLDGTQWKVNWTKQNGEV-WFEKGWKEFVEHYSLDHGHLI 60

Query: 60 RFSFRHDSHVRRTQFHVEIHESGMEIDH 87
           F +   S +      + + +S +EID+
Sbjct: 61 FFKYEGTSQIDV----LILDQSALEIDY 84


>Glyma20g24230.1 
          Length = 200

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 15/112 (13%)

Query: 1   MPRKLVSKHWDGISNPISLLLP-GATWEVRWEKRGYDVIMLGDEWKNFAMHYSLDVEHLL 59
           +P K   +H D +SNP+ +  P G  WEV+W K+  +V      WK F  +Y L+  HL+
Sbjct: 2   IPNKFTKRHGDRLSNPVFMKPPDGTEWEVQWTKQNGEV-WFEKGWKEFVENYFLNHGHLV 60

Query: 60  RFSFRHDSHVRRTQFHVEIHE-SGMEIDHYPFKQGSADSGEESDK--STDDE 108
            F++   S     Q HV I + + +EI HYP    S+ + EE+D    +DDE
Sbjct: 61  LFNYEGTS-----QIHVLILDHTTLEI-HYP----SSHTREENDNLVQSDDE 102