Miyakogusa Predicted Gene

Lj5g3v1696670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1696670.1 Non Chatacterized Hit- tr|C5YXQ2|C5YXQ2_SORBI
Putative uncharacterized protein Sb09g019910
OS=Sorghu,46,3e-19,seg,NULL; zf-CW,Zinc finger, CW-type; FAMILY NOT
NAMED,NULL; ZF_CW,Zinc finger, CW-type,CUFF.55710.1
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16930.1                                                       152   9e-38
Glyma10g02860.1                                                       150   2e-37
Glyma01g00520.1                                                        87   5e-18
Glyma07g15620.1                                                        84   4e-17

>Glyma02g16930.1 
          Length = 177

 Score =  152 bits (383), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 81/101 (80%), Gaps = 3/101 (2%)

Query: 1   MATGQEIXXXXXXXXXXRSVLSQGSIDVYAAQCIKCLKWRVIDTQQEFEEIRHKVSQEPF 60
           M +GQEI          +  LSQGS+D+YAAQC  CLKWR IDTQ+EFEEIR KV++EPF
Sbjct: 1   MKSGQEISKTPSSS---KRTLSQGSVDIYAAQCKNCLKWREIDTQEEFEEIRSKVTEEPF 57

Query: 61  DCSRKANCSCDDPADIEYDSSRTWVIDKPNLPKTPEGFKRS 101
            CSRKAN SCD+P DIEYDS+RTWVIDKPNLPKTP+GFKRS
Sbjct: 58  LCSRKANSSCDEPGDIEYDSTRTWVIDKPNLPKTPQGFKRS 98


>Glyma10g02860.1 
          Length = 193

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 80/101 (79%), Gaps = 3/101 (2%)

Query: 1   MATGQEIXXXXXXXXXXRSVLSQGSIDVYAAQCIKCLKWRVIDTQQEFEEIRHKVSQEPF 60
           M  GQEI          +  LSQGS+D+YAAQC  CLKWR IDTQ+EFEEIR KV++EPF
Sbjct: 17  MKGGQEISKTPSSS---KRTLSQGSVDIYAAQCKNCLKWREIDTQEEFEEIRSKVAEEPF 73

Query: 61  DCSRKANCSCDDPADIEYDSSRTWVIDKPNLPKTPEGFKRS 101
            CSRKAN SCD+P DI+YDSSRTWVIDKPNLPKTP+GFKRS
Sbjct: 74  LCSRKANSSCDEPGDIKYDSSRTWVIDKPNLPKTPQGFKRS 114


>Glyma01g00520.1 
          Length = 312

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 4/80 (5%)

Query: 25  SIDVYAAQCIKCLKWRVIDTQQEFEEIRHKVSQEPFDCSR----KANCSCDDPADIEYDS 80
           S+ V+  QC  CLKWR+I T++++EEIR  + ++PF C +    + + SCDDP DI  D 
Sbjct: 97  SVGVFTVQCASCLKWRLIPTKEKYEEIREHIIEQPFVCQKAREWRPDVSCDDPEDISQDG 156

Query: 81  SRTWVIDKPNLPKTPEGFKR 100
           SR W IDKPN+ + P G++R
Sbjct: 157 SRVWAIDKPNIAQPPAGWER 176


>Glyma07g15620.1 
          Length = 309

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 4/80 (5%)

Query: 25  SIDVYAAQCIKCLKWRVIDTQQEFEEIRHKVSQEPFDCSR----KANCSCDDPADIEYDS 80
           S+  +  QC  C KWR+I T++++EEIR  + ++PF C +    + + SCDDP DI  D 
Sbjct: 97  SVGAFTVQCASCFKWRLIPTKEKYEEIREHILEQPFVCQKAREWRPHVSCDDPEDISQDG 156

Query: 81  SRTWVIDKPNLPKTPEGFKR 100
           SR W IDKPN+ + P G++R
Sbjct: 157 SRVWAIDKPNIAQPPAGWER 176