Miyakogusa Predicted Gene

Lj5g3v0998690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0998690.1 tr|F2EI65|F2EI65_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2 SV=1,37.24,6e-17,
,NODE_48508_length_1395_cov_42.415771.path2.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31220.1                                                       233   5e-62

>Glyma03g31220.1 
          Length = 419

 Score =  233 bits (594), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/137 (81%), Positives = 124/137 (90%)

Query: 1   MSCNSSSQKLSVIKVVSFAGDGFVPTCLGNIPSTGKLWMVTGVSSLPGSNYPSVARVRVI 60
           +SCN S+Q LSV KVVS AG+ FVPTCLG+ PS GKLWMVTGVS LPG NYPS+A VRVI
Sbjct: 283 LSCNVSAQTLSVAKVVSVAGEAFVPTCLGSSPSIGKLWMVTGVSGLPGFNYPSLACVRVI 342

Query: 61  SGIDGDQEPVVLGDDNIPGGEKLLQTLQGTASVDDNAFLAAAEAVKTAMCNLLVKKQYPA 120
           S ID ++EPVVLGDDNIPGGEKLL+TLQG+ASVDDNAFLAAAEAVKTAMCNLL+KKQYP+
Sbjct: 343 SSIDVEKEPVVLGDDNIPGGEKLLETLQGSASVDDNAFLAAAEAVKTAMCNLLIKKQYPS 402

Query: 121 ENREYRKKTRNDRKHKG 137
           ENREYRKK+RNDRK KG
Sbjct: 403 ENREYRKKSRNDRKLKG 419