Miyakogusa Predicted Gene

Lj5g3v0586520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0586520.1 tr|D5G958|D5G958_TUBMM Whole genome shotgun
sequence assembly, scaffold_161, strain Mel28 OS=Tuber
m,27.64,7e-19,RPA_C,Replication protein A, C-terminal;
tRNA_anti,Nucleic acid binding, OB-fold,
tRNA/helicase-type,CUFF.53304.1
         (270 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g29730.1                                                       401   e-112
Glyma14g17270.1                                                       392   e-109
Glyma13g00960.1                                                       211   9e-55
Glyma17g07020.1                                                       138   7e-33
Glyma08g18770.1                                                        49   4e-06

>Glyma17g29730.1 
          Length = 277

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/275 (72%), Positives = 227/275 (82%), Gaps = 6/275 (2%)

Query: 1   MFSVTQFDXXXXXX-----XXXXXQLNDSSPAPQKGRESQGLVPVTVKQINEASQSGDEK 55
           MFS +QFD                 LNDSSPAP K RE+QGLVPVTVKQI+EASQSGDEK
Sbjct: 1   MFSGSQFDATTAFSGGGFMSSQPSTLNDSSPAPSKSRETQGLVPVTVKQISEASQSGDEK 60

Query: 56  SSFVINGVELTNVTLVGMVFEKAERNTDVNFVLDDGTGRIKCRRWINDAFDTQEVEEIMN 115
           S+FVINGV+L NVTL+GMVFEK ERNTDVNFVLDDGTGRIKCRRW+N+AFDT+E+E +MN
Sbjct: 61  SNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEAVMN 120

Query: 116 GMYVRVNGHLKSFQGVRQVAAFSVRPVVNFDEIPFHFIDCIHHHLRSKLKMEGTISTDPP 175
           GMYVRV GHLKSFQGV+Q+  FS RPV NFDEIPFHFIDCIH+HLRSK+KMEG I++  P
Sbjct: 121 GMYVRVYGHLKSFQGVKQLVTFSARPVTNFDEIPFHFIDCIHNHLRSKIKMEG-ITSSNP 179

Query: 176 ASDSSLKTPVRNTSNGSQAPSSTPAYAQYGVDGLKDCDKLVIDYLQQHSDMSDDRGIHAN 235
           +S SSL TP ++  NGSQAPSS P  AQ+ VDGLK  DKL++DYL+QHSDMSD RGIH +
Sbjct: 180 SSGSSLNTPGKSAPNGSQAPSSNPVSAQHSVDGLKGIDKLIMDYLEQHSDMSDGRGIHVD 239

Query: 236 ELSRELKLPLDKIMLSLRTLGDDGLVYSTIDDFHY 270
           ELSRELKLP++KI LSL+TL DDG +YSTIDD HY
Sbjct: 240 ELSRELKLPMEKIKLSLKTLADDGEIYSTIDDDHY 274


>Glyma14g17270.1 
          Length = 292

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/275 (70%), Positives = 223/275 (81%), Gaps = 8/275 (2%)

Query: 1   MFSVTQFDXXXXXX-----XXXXXQLNDSSPAPQKGRESQGLVPVTVKQINEASQSGDEK 55
           MFS +QFD                 LNDSSPAP   RE+ GLVPVTVKQI+EASQSGDEK
Sbjct: 18  MFSGSQFDATTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQSGDEK 77

Query: 56  SSFVINGVELTNVTLVGMVFEKAERNTDVNFVLDDGTGRIKCRRWINDAFDTQEVEEIMN 115
           S+FVINGV+L NVTLVGM+FEK ERNTDV+FVLDDGTGRIKCRRWIN+AFDT+E+E +MN
Sbjct: 78  SNFVINGVDLNNVTLVGMMFEKVERNTDVSFVLDDGTGRIKCRRWINEAFDTKEMEAVMN 137

Query: 116 GMYVRVNGHLKSFQGVRQVAAFSVRPVVNFDEIPFHFIDCIHHHLRSKLKMEGTISTDPP 175
            MYVRV GHLKSFQGV+Q+ AFSVRPV NFDEIPFHFIDCIH+HLRSK+K+EG  S + P
Sbjct: 138 DMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEGITSAN-P 196

Query: 176 ASDSSLKTPVRNTSNGSQAPSSTPAYAQYGVDGLKDCDKLVIDYLQQHSDMSDDRGIHAN 235
           +S SSL+TPV++  N SQA  S P  AQ+ VDGLK  DKLV+DYL+QHSD SD RGIH +
Sbjct: 197 SSGSSLETPVKSAPNRSQA--SNPVCAQHSVDGLKGIDKLVMDYLEQHSDRSDGRGIHVD 254

Query: 236 ELSRELKLPLDKIMLSLRTLGDDGLVYSTIDDFHY 270
           ELSRELKLP++KI LSL+TL DDG +YSTIDD HY
Sbjct: 255 ELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHY 289


>Glyma13g00960.1 
          Length = 277

 Score =  211 bits (536), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 116/253 (45%), Positives = 163/253 (64%), Gaps = 15/253 (5%)

Query: 23  DSSPAPQKGRESQGLVPVTVKQINEASQSGDEKSSFVINGVELTNVTLVGMVFEKAERNT 82
           DSS  P K R++Q L+P+TVKQI +ASQS D+K + +I+GV++TNVTLVG V  KA R T
Sbjct: 29  DSSFVPSKNRDAQSLLPLTVKQIYDASQSSDDKINLIIDGVDVTNVTLVGRVSNKAGRIT 88

Query: 83  DVNFVLDDGTGRIKCRRWINDAFDTQEVEEIMNGMYVRVNGHLKSFQGVRQVAAFSVRPV 142
           DV FVLDDGTGRI+C +W+++A DT E E I+ GMY R++G LK FQG R +  FS RPV
Sbjct: 89  DVTFVLDDGTGRIECNKWLHEAVDTNEAEAILEGMYARLHGQLKHFQGKRTLNVFSFRPV 148

Query: 143 VNFDEIPFHFIDCIHHHL-RSKLKMEGTISTDPPASDSSLKTPVRNTSNGSQAPSSTPA- 200
            +F+EI  HF DCI+ HL  SKL+      T  P    S   P    + G QA    P  
Sbjct: 149 TDFNEIASHFTDCIYVHLYNSKLR------TSVPNQQHSSPIP---PTIGYQAQVVPPTN 199

Query: 201 -YAQYGVDGLKD--CDKLVIDYLQQHSDMSDDRGIHANELSRELKLPLDKIMLSLRTLGD 257
            ++   V+G K    + +V+D+L   ++ S + G+H + +++ L + LDK+ML+++ L D
Sbjct: 200 QFSDQHVNGQKGVTVEAMVLDFLHHPANSSRNEGVHRDHIAQHLGISLDKLMLAVKNLID 259

Query: 258 DGLVYSTIDDFHY 270
           +G +Y TI D HY
Sbjct: 260 EGAIYETIGD-HY 271


>Glyma17g07020.1 
          Length = 178

 Score =  138 bits (347), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 112/181 (61%), Gaps = 10/181 (5%)

Query: 50  QSGDEKSSFVINGVELTNVTLVGMVFEKAERNTDVNFVLDDGTGRIKCRRWINDAFDTQE 109
           QS D++ + +++GV++TNVTLVG V  K  R TDV FVLDDGTGRI+C +W+++A DT E
Sbjct: 2   QSSDDRINLIVDGVDVTNVTLVGRVSNKTGRITDVTFVLDDGTGRIECSKWLHEAVDTNE 61

Query: 110 VEEIMNGMYVRVNGHLKSFQGVRQVAAFSVRPVVNFDEIPFHFIDCIHHHL-RSKLKMEG 168
            E I++GMY R++G LK FQ  R +  FS RPV +F+EI  HF DCI+ HL  S+L+   
Sbjct: 62  AEAILDGMYARLHGQLKHFQRKRTLTVFSFRPVTDFNEIASHFSDCIYVHLYNSRLR--- 118

Query: 169 TISTDPPASDSSLKTPVRNTSNGSQAPSSTPAYAQYGVDGLK--DCDKLVIDYLQQHSDM 226
             S+ P    SS   P       +QA   T  ++   ++G K    + +V+D+L   ++ 
Sbjct: 119 --SSVPNQQHSSPIPPT--IVYQAQAVPPTNQFSDQHINGQKGVTVEAMVLDFLHHPTNS 174

Query: 227 S 227
           S
Sbjct: 175 S 175


>Glyma08g18770.1 
          Length = 183

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 13/119 (10%)

Query: 51  SGDEKSSFVINGVELTNVTLVGMV-FEKAERNTDVNFVLDDGTGRIKCRRWINDA----- 104
           S D  +SF   G+ ++ V  VG +     + +  + F +DDGT  + C  W+NDA     
Sbjct: 36  SSDATTSFFRRGIPISRVETVGTITLRDLKHDRFLRFAVDDGTACVPCVLWLNDANSPSV 95

Query: 105 -------FDTQEVEEIMNGMYVRVNGHLKSFQGVRQVAAFSVRPVVNFDEIPFHFIDCI 156
                     +    +  G   RV G L  F+G  QV    V    + +   FH +DCI
Sbjct: 96  ARRRRHELAARFAALVKLGAVARVRGRLSRFRGTLQVTVSDVAIERDPNAEIFHRLDCI 154