Miyakogusa Predicted Gene

Lj4g3v2785700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2785700.1 Non Chatacterized Hit- tr|I3T1G1|I3T1G1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
LSM,Ribonucleoprotein LSM domain; SMALL NUCLEAR RIBONUCLEOPROTEIN
SM,NULL; no description,,CUFF.51630.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g15260.1                                                       212   1e-55
Glyma05g31950.1                                                       212   1e-55
Glyma05g31950.2                                                       193   3e-50
Glyma03g37170.2                                                        58   2e-09
Glyma19g39780.1                                                        58   2e-09
Glyma02g17430.2                                                        58   2e-09
Glyma03g37170.1                                                        58   3e-09
Glyma10g02380.1                                                        58   3e-09
Glyma02g17430.1                                                        58   3e-09
Glyma03g37170.3                                                        57   4e-09
Glyma18g52210.1                                                        52   2e-07
Glyma02g10640.1                                                        52   2e-07
Glyma17g32940.1                                                        52   2e-07
Glyma19g33700.1                                                        51   3e-07
Glyma03g30880.1                                                        51   3e-07

>Glyma08g15260.1 
          Length = 131

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 99/103 (96%), Positives = 103/103 (100%)

Query: 1   MSRSLGIPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60
           MSRSLGIPVKLLHE+SGH+V+VELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGR 103
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAR+KGKGASLGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 103


>Glyma05g31950.1 
          Length = 131

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 99/103 (96%), Positives = 103/103 (100%)

Query: 1   MSRSLGIPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60
           MSRSLGIPVKLLHE+SGH+V+VELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGR 103
           EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAR+KGKGASLGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 103


>Glyma05g31950.2 
          Length = 117

 Score =  193 bits (491), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 89/93 (95%), Positives = 93/93 (100%)

Query: 1  MSRSLGIPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60
          MSRSLGIPVKLLHE+SGH+V+VELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL
Sbjct: 1  MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVK 93
          EHVFIRGSKVRFMVIPDMLKNAPMFKRLDAR+K
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIK 93


>Glyma03g37170.2 
          Length = 144

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma19g39780.1 
          Length = 148

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma02g17430.2 
          Length = 147

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma03g37170.1 
          Length = 148

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma10g02380.1 
          Length = 149

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma02g17430.1 
          Length = 149

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma03g37170.3 
          Length = 128

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 7  IPVKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDG-KTSQLEHVFI 65
          +P+ LL  + GH + VELK+GE Y G ++ C+   N  L  +  T+KDG +  ++   +I
Sbjct: 2  LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 66 RGSKVRFMVIPD 77
          RG+ ++++ +PD
Sbjct: 62 RGNTIKYLRVPD 73


>Glyma18g52210.1 
          Length = 115

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 9   VKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68
           V+ L + +   VS+ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 4   VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63

Query: 69  KVRFMVIPDMLKNAPMFKRLDARVKGKGASLG 100
            +R+ ++PD L    +      ++K K  + G
Sbjct: 64  NIRYYILPDSLNLETLLVEETPKIKPKKPTAG 95


>Glyma02g10640.1 
          Length = 116

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 9   VKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68
           V+ L + +   VS+ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 4   VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63

Query: 69  KVRFMVIPDMLKNAPMFKRLDARVKGKGASLG 100
            +R+ ++PD L    +      ++K K  + G
Sbjct: 64  NIRYYILPDSLNLETLLVEETPKIKPKKPTAG 95


>Glyma17g32940.1 
          Length = 31

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 27/30 (90%)

Query: 1  MSRSLGIPVKLLHESSGHIVSVELKSGELY 30
          M+R LGIPVKLLHE+SGH+V VELKS ELY
Sbjct: 1  MNRRLGIPVKLLHEASGHVVMVELKSRELY 30


>Glyma19g33700.1 
          Length = 114

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 9   VKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68
           V+ L + +   VS+ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 4   VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63

Query: 69  KVRFMVIPDMLKNAPMFKRLDARVKGKGASLG 100
            +R+ ++PD L    +      ++K K  + G
Sbjct: 64  NIRYYILPDSLNLETLLVEEAPKIKPKKPTAG 95


>Glyma03g30880.1 
          Length = 114

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 9   VKLLHESSGHIVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68
           V+ L + +   VS+ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 4   VRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63

Query: 69  KVRFMVIPDMLKNAPMFKRLDARVKGKGASLG 100
            +R+ ++PD L    +      ++K K  + G
Sbjct: 64  NIRYYILPDSLNLETLLVEEAPKIKPKKPTAG 95