Miyakogusa Predicted Gene

Lj4g3v2691880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2691880.1 Non Chatacterized Hit- tr|I1LTE9|I1LTE9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56950
PE,92.13,0,seg,NULL; coiled-coil,NULL; no description,Pre-mRNA
3'-end-processing endonuclease polyadenylation
f,NODE_37852_length_1272_cov_130.597488.path1.1
         (306 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g29040.1                                                       555   e-158
Glyma08g20140.1                                                       543   e-154

>Glyma12g29040.1 
          Length = 689

 Score =  555 bits (1430), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 270/305 (88%), Positives = 286/305 (93%)

Query: 1   MNGLTAPLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLMTQFA 60
           MNGLTAPLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKL++QFA
Sbjct: 384 MNGLTAPLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLISQFA 443

Query: 61  DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAPDD 120
           DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMA DD
Sbjct: 444 DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAADD 503

Query: 121 LHVFSQLSTANVTQRITIPHSGAFSIIQHRLKQIYESVEPSVDEESGVPTLLVHERVTVK 180
           LHVFSQLSTAN+TQRITIP+SGAF++IQHRLKQIYESV  SVDEESGVPTL VHE VTVK
Sbjct: 504 LHVFSQLSTANITQRITIPYSGAFNVIQHRLKQIYESVAQSVDEESGVPTLQVHECVTVK 563

Query: 181 HESEKHISLHWPSDPISDMVSDSVVALILNMNRDVPKIMDEADAIXXXXXXXXXXXXVMH 240
           HESEKH+SLHW SDP+SDMVSDS+VAL+LN+NRDVPKI++E+DAI            VM 
Sbjct: 564 HESEKHVSLHWASDPMSDMVSDSIVALVLNINRDVPKIVNESDAIKIEEENEKKAEKVMQ 623

Query: 241 ALLVSLFGDVKVGENGKLIINIDGNVAELNKESGEVESENEGLKERVKTAFRRIQSSVKP 300
           ALLVSLFGDVKVGENGKLIINIDGNVAELNKESGEVESENEGLKERV+TAFRRIQSSVKP
Sbjct: 624 ALLVSLFGDVKVGENGKLIINIDGNVAELNKESGEVESENEGLKERVRTAFRRIQSSVKP 683

Query: 301 IPLSA 305
           IP+SA
Sbjct: 684 IPVSA 688


>Glyma08g20140.1 
          Length = 688

 Score =  543 bits (1398), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/305 (86%), Positives = 280/305 (91%)

Query: 1   MNGLTAPLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLMTQFA 60
           MNGL+APLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGEAN+MGRLKQKL +QFA
Sbjct: 383 MNGLSAPLNMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGEANQMGRLKQKLTSQFA 442

Query: 61  DRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAPDD 120
           DRNTKILTPKNCQSVEM+FNSQKMAKTIG+LAEKTPEVGETVSGLLVKKGFTYQIMAPDD
Sbjct: 443 DRNTKILTPKNCQSVEMHFNSQKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMAPDD 502

Query: 121 LHVFSQLSTANVTQRITIPHSGAFSIIQHRLKQIYESVEPSVDEESGVPTLLVHERVTVK 180
           LHVFSQLST N+TQRIT+P+SGAFS IQHRLK+IYESVE SVDEESGVP L VHE VTVK
Sbjct: 503 LHVFSQLSTTNITQRITVPYSGAFSFIQHRLKRIYESVEQSVDEESGVPELQVHECVTVK 562

Query: 181 HESEKHISLHWPSDPISDMVSDSVVALILNMNRDVPKIMDEADAIXXXXXXXXXXXXVMH 240
           HE+EKHISLHW SDPISDMVSDS+VALILN+NRDVPKIM E+D I            VMH
Sbjct: 563 HEAEKHISLHWTSDPISDMVSDSIVALILNINRDVPKIMAESDVIKIEEENKKKAEKVMH 622

Query: 241 ALLVSLFGDVKVGENGKLIINIDGNVAELNKESGEVESENEGLKERVKTAFRRIQSSVKP 300
           ALLVSLFGDVK GENGKLIINIDGNVA LNKESGEVESENEGLKERV+ AF+RIQSSVKP
Sbjct: 623 ALLVSLFGDVKAGENGKLIINIDGNVAVLNKESGEVESENEGLKERVRAAFQRIQSSVKP 682

Query: 301 IPLSA 305
           IPLSA
Sbjct: 683 IPLSA 687