Miyakogusa Predicted Gene

Lj4g3v2120510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120510.1 Non Chatacterized Hit- tr|B3H692|B3H692_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,31.84,5e-18,seg,NULL,CUFF.50272.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g17550.1                                                       198   3e-51
Glyma09g06290.1                                                       194   7e-50
Glyma17g06920.1                                                       189   2e-48
Glyma13g00830.1                                                       120   7e-28

>Glyma15g17550.1 
          Length = 203

 Score =  198 bits (504), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/212 (54%), Positives = 142/212 (66%), Gaps = 17/212 (8%)

Query: 1   METQSSKRRRVYSLEPSKVVQSLFARNYLNYLVPALMKIKAKSPTSAEDS--CRDCDVKK 58
           ME Q +KRRRVYSLEP+KV Q+ FARNY+NYLVPALMKIK +S +S + S  C D +++ 
Sbjct: 1   MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERSTSSDQHSGYCDD-NIQN 59

Query: 59  NVKYEVDMAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSRICD 118
            VKYEVDMAMV SAQGFAWS  L +KLQ+D     NV    TSF +  S     SSR+C 
Sbjct: 60  VVKYEVDMAMVHSAQGFAWSNALSVKLQRDR---VNVDCDTTSFGEGSS-----SSRVCG 111

Query: 119 QN-EIVPVDFCANXXXXXXXXXXXEMPELEKGL----GRXXXXXXXXQLKSLRKLVPGGE 173
           QN E+VP+D   +           EMPE+++GL              QLKSLR+L+PGGE
Sbjct: 112 QNCEMVPLDNFPSNPSLKSNNKCKEMPEMKRGLREDDDGDEDEVINGQLKSLRRLMPGGE 171

Query: 174 EICDEDMVGELESYVRCLQMQVNVLQCLVAET 205
           E+C E MV EL+SYV CLQMQVN+L+CL AET
Sbjct: 172 EMCSEQMVTELQSYVSCLQMQVNILRCL-AET 202


>Glyma09g06290.1 
          Length = 207

 Score =  194 bits (492), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/216 (53%), Positives = 140/216 (64%), Gaps = 21/216 (9%)

Query: 1   METQSSKRRRVYSLEPSKVVQSLFARNYLNYLVPALMKIKAKSPTSAE----DSCRDCDV 56
           ME Q +KRRRVYSLEP+KV Q+ FARNY+N LVPALMKIK +S TSAE     SC D ++
Sbjct: 1   MEGQPAKRRRVYSLEPTKVEQAAFARNYMNCLVPALMKIKERSSTSAEQHSVHSCDDDNI 60

Query: 57  KKNVKYEVDMAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSRI 116
           +  VKYEVDMAMV SAQG+AWS  L +KLQ++     NV    TSF       E   SR+
Sbjct: 61  QNVVKYEVDMAMVRSAQGYAWSNALSVKLQRNR---VNVDCDTTSF------GEGSPSRV 111

Query: 117 CDQN-EIVPVDFCANXXXXXXXXXXXEMPELEKGL------GRXXXXXXXXQLKSLRKLV 169
           C QN E+VP+   ++           EM E+++GL      G         QLKSLR+L+
Sbjct: 112 CGQNYEMVPLSNFSSNPSLKSNNKCKEMSEMKRGLREDDDGGGDEDEVIKGQLKSLRRLI 171

Query: 170 PGGEEICDEDMVGELESYVRCLQMQVNVLQCLVAET 205
           PGGEE+C E MV EL+SYV CLQMQVN+LQCL AET
Sbjct: 172 PGGEEMCSEQMVTELQSYVSCLQMQVNILQCL-AET 206


>Glyma17g06920.1 
          Length = 209

 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/209 (53%), Positives = 144/209 (68%), Gaps = 14/209 (6%)

Query: 1   METQSSKRRRVYSLEPSKVVQSLFARNYLNYLVPALMKIKAKSPTSAEDSCRDC-DVKKN 59
           ME Q +KRRRVYS+EP+++VQS+F RNYLN+LVPAL+KIK KS  S E+  R C D+   
Sbjct: 1   MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKIKEKS--SVEEDRRHCDDINNA 58

Query: 60  VKYEVDMAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSR-ICD 118
           VKYEVDMAMV SAQGFAWS GLK KLQ D DV+ N AA +TSFL+++ + E  SS+   D
Sbjct: 59  VKYEVDMAMVLSAQGFAWSNGLKDKLQSD-DVHVN-AAKSTSFLENDEAGEGSSSKNAYD 116

Query: 119 QNEIV-PVDFCANXXXXXXXXXXXEMPELEKGLGRXXXXXX----XXQLKSLRKLVPGGE 173
           +NE+V P+++ ++           +M E+++ L R            Q K LR+L+PGGE
Sbjct: 117 KNEVVLPMEYFSS--NPSSKSKCKDMSEMKRDLAREDDDKEDEDISNQWKKLRRLIPGGE 174

Query: 174 EIC-DEDMVGELESYVRCLQMQVNVLQCL 201
           E+C DE MV ELESY+ CLQMQVN LQ L
Sbjct: 175 EMCDDEQMVSELESYISCLQMQVNALQFL 203


>Glyma13g00830.1 
          Length = 141

 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 72/146 (49%), Positives = 97/146 (66%), Gaps = 12/146 (8%)

Query: 66  MAMVFSAQGFAWSEGLKLKLQKDHDVNENVAAANTSFLKSESSTEEGSSR--ICDQNEIV 123
           MAMV SAQGFAWS GLK+KLQ D DV+ N AA +T FL++E+S  EGSS+  + D+NE+V
Sbjct: 1   MAMVLSAQGFAWSNGLKVKLQSD-DVHVN-AAKSTRFLENEAS--EGSSKNNVYDKNEVV 56

Query: 124 PVDFCANXXXXXXXXXXXEMPELEKGLGRXXXXXX---XXQLKSLRKLVPGGEEICD-ED 179
           P+++ ++           +M E+++ L R           Q K LR+++PGGEE+CD E 
Sbjct: 57  PMEYFSSNPSSRSKCK--DMSEMKRDLAREDDKEAEDINNQWKRLRRMIPGGEEMCDDEQ 114

Query: 180 MVGELESYVRCLQMQVNVLQCLVAET 205
           MV ELESY+ CLQMQVN LQ L+  T
Sbjct: 115 MVSELESYINCLQMQVNALQFLLPHT 140