Miyakogusa Predicted Gene

Lj4g3v1880510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1880510.1 tr|A9NJT6|A9NJT6_PICSI Ribosomal protein OS=Picea
sitchensis PE=3 SV=1,61.84,2e-18,rpmJ_bact: ribosomal protein
L36,Ribosomal protein L36; Q8W464_ARATH_Q8W464;,NULL;
Ribosomal_L36,Rib,CUFF.49802.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g23530.1                                                       136   5e-33
Glyma17g12290.2                                                       135   7e-33
Glyma17g12290.1                                                       135   7e-33

>Glyma13g23530.1 
          Length = 99

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/96 (69%), Positives = 74/96 (77%)

Query: 1  MKVRSSMKKMCEFCMTVKRRGRVYVICSANPKHKQRQGMSTFANEGPSNPVSLEINSAKQ 60
          MKVRSS+KKMCEFC  VKRRGR+YVICS NPKHKQRQGM+TFA+EGPS PVS E +S K 
Sbjct: 1  MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEGPSQPVSSETSSCKI 60

Query: 61 EIRLPLTLRLGPASIFPQWHNLSMLYGWRVGLTSIL 96
           I+     R G     PQ H+LSMLYGWRVGL SIL
Sbjct: 61 MIKPAQIARPGRICTSPQRHSLSMLYGWRVGLASIL 96


>Glyma17g12290.2 
          Length = 99

 Score =  135 bits (341), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 76/99 (76%)

Query: 1  MKVRSSMKKMCEFCMTVKRRGRVYVICSANPKHKQRQGMSTFANEGPSNPVSLEINSAKQ 60
          MKVRSS+KKMCEFC  VKRRGR+YVICS NPKHKQRQGM+TFA+EGPS PVS E +S K 
Sbjct: 1  MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEGPSRPVSSETSSWKM 60

Query: 61 EIRLPLTLRLGPASIFPQWHNLSMLYGWRVGLTSILFRK 99
           I+     R G  S  PQ H+LSMLYGWRVGL SIL  K
Sbjct: 61 GIKPAQIARPGLISNTPQRHSLSMLYGWRVGLASILSMK 99


>Glyma17g12290.1 
          Length = 99

 Score =  135 bits (341), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 76/99 (76%)

Query: 1  MKVRSSMKKMCEFCMTVKRRGRVYVICSANPKHKQRQGMSTFANEGPSNPVSLEINSAKQ 60
          MKVRSS+KKMCEFC  VKRRGR+YVICS NPKHKQRQGM+TFA+EGPS PVS E +S K 
Sbjct: 1  MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEGPSRPVSSETSSWKM 60

Query: 61 EIRLPLTLRLGPASIFPQWHNLSMLYGWRVGLTSILFRK 99
           I+     R G  S  PQ H+LSMLYGWRVGL SIL  K
Sbjct: 61 GIKPAQIARPGLISNTPQRHSLSMLYGWRVGLASILSMK 99