Miyakogusa Predicted Gene

Lj4g3v0668290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0668290.1 Non Chatacterized Hit- tr|K4A2Q9|K4A2Q9_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,63.27,0.000000002,NusB,NusB/RsmB/TIM44; no
description,NusB/RsmB/TIM44; NusB-like,NusB/RsmB/TIM44,CUFF.47852.1
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g35080.2                                                       363   e-100
Glyma20g02940.1                                                       362   e-100
Glyma07g35080.1                                                       355   5e-98

>Glyma07g35080.2 
          Length = 286

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/272 (68%), Positives = 214/272 (78%), Gaps = 20/272 (7%)

Query: 16  VPLPSPSSFATPSKCFPLPSSLVNHNRDFFLAKPQNKTLFTRCSVASSAVAVDRDEASGL 75
           +P+P  SSF         PSSL  H     L+ PQN     R S+ +S  A+   E   L
Sbjct: 23  IPIPQRSSF---------PSSLPTH-----LSLPQNAAFSLRTSLRTSTFALAPHETPVL 68

Query: 76  GKPD----TAGLPKVDKTGRFCSPRAARELALSIIYASCLEGLDPVRLFEKRLNERREAG 131
            KPD    +  LPK+DKTGRFCSPRAARELALSIIYA+CLEG+DPVRLFEKR+N RREAG
Sbjct: 69  DKPDNNSSSPSLPKIDKTGRFCSPRAARELALSIIYAACLEGMDPVRLFEKRMNARREAG 128

Query: 132 YQFDQRKLLEYNPMSFAGPPVTVQSEEEANELLRNIEKESDLEAEILSAPPKLVYNKLIL 191
           Y+F++ KLLEYN MSF G PVTV S+EEANELLR+IE+ES +E  +L+APPKLVYN LIL
Sbjct: 129 YKFNEEKLLEYNHMSFGGSPVTVGSDEEANELLRHIEEESAIE--VLTAPPKLVYNTLIL 186

Query: 192 RFTRKLLVAVRDSWDSHVLVINKVVPPTWKDEPAGKILELSILHLAMSEMTKLETIHQIV 251
           RFT+KLLVAVRD+WDSHVLVINK+VP  WK+EPAGKILELSILHLAMSEM  LET HQIV
Sbjct: 187 RFTKKLLVAVRDTWDSHVLVINKIVPQNWKNEPAGKILELSILHLAMSEMEVLETRHQIV 246

Query: 252 INEAVDLAKRYCDGASSRIINGCLRTFYRDTE 283
           INEAVDLAKR+CDGA+ RIINGCLRTF+R+ E
Sbjct: 247 INEAVDLAKRFCDGAAPRIINGCLRTFFRELE 278


>Glyma20g02940.1 
          Length = 289

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/285 (68%), Positives = 226/285 (79%), Gaps = 16/285 (5%)

Query: 11  MDGACVPL-PSPSS-FATPSKCFPLP-----SSLVNHNRDFFLAKPQNKTLFTRCSVASS 63
           M+G  +P+ PSPSS  ATP    P+P      S + HNR F     QN     R S+ +S
Sbjct: 1   MEGVLLPVCPSPSSCSATPKPRIPIPLRSSFPSPLLHNRFF----SQNAAFSLRNSLRTS 56

Query: 64  AVAVDRDEASGLGKPDTAG-----LPKVDKTGRFCSPRAARELALSIIYASCLEGLDPVR 118
             A+ + EA  LGKPD        LPK+DKTGRFCSPRAARELALSIIYA+CLEG+DPVR
Sbjct: 57  TFALAQHEAPVLGKPDNNNNSSPYLPKIDKTGRFCSPRAARELALSIIYAACLEGMDPVR 116

Query: 119 LFEKRLNERREAGYQFDQRKLLEYNPMSFAGPPVTVQSEEEANELLRNIEKESDLEAEIL 178
           LFEKR+N RREAGY+F++ KLLEYN MSF GPPVTV S+EEANELLR+IE+ES +EAE+L
Sbjct: 117 LFEKRMNARREAGYKFNEEKLLEYNHMSFGGPPVTVGSDEEANELLRHIEEESAIEAEVL 176

Query: 179 SAPPKLVYNKLILRFTRKLLVAVRDSWDSHVLVINKVVPPTWKDEPAGKILELSILHLAM 238
           +APPKLVYNKLILRFT+KLLVAVRD+WDSHVLVINK+ P  WK+EPA KILELSILHLAM
Sbjct: 177 TAPPKLVYNKLILRFTKKLLVAVRDTWDSHVLVINKIAPQNWKNEPAAKILELSILHLAM 236

Query: 239 SEMTKLETIHQIVINEAVDLAKRYCDGASSRIINGCLRTFYRDTE 283
           SEM  LET HQIVINEAVDLAKR+CDGA+ RIINGCLRTF+R+ E
Sbjct: 237 SEMEVLETRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFFRELE 281


>Glyma07g35080.1 
          Length = 288

 Score =  355 bits (910), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 188/272 (69%), Positives = 216/272 (79%), Gaps = 18/272 (6%)

Query: 16  VPLPSPSSFATPSKCFPLPSSLVNHNRDFFLAKPQNKTLFTRCSVASSAVAVDRDEASGL 75
           +P+P  SSF         PSSL  H     L+ PQN     R S+ +S  A+   E   L
Sbjct: 23  IPIPQRSSF---------PSSLPTH-----LSLPQNAAFSLRTSLRTSTFALAPHETPVL 68

Query: 76  GKPD----TAGLPKVDKTGRFCSPRAARELALSIIYASCLEGLDPVRLFEKRLNERREAG 131
            KPD    +  LPK+DKTGRFCSPRAARELALSIIYA+CLEG+DPVRLFEKR+N RREAG
Sbjct: 69  DKPDNNSSSPSLPKIDKTGRFCSPRAARELALSIIYAACLEGMDPVRLFEKRMNARREAG 128

Query: 132 YQFDQRKLLEYNPMSFAGPPVTVQSEEEANELLRNIEKESDLEAEILSAPPKLVYNKLIL 191
           Y+F++ KLLEYN MSF G PVTV S+EEANELLR+IE+ES +EAE+L+APPKLVYN LIL
Sbjct: 129 YKFNEEKLLEYNHMSFGGSPVTVGSDEEANELLRHIEEESAIEAEVLTAPPKLVYNTLIL 188

Query: 192 RFTRKLLVAVRDSWDSHVLVINKVVPPTWKDEPAGKILELSILHLAMSEMTKLETIHQIV 251
           RFT+KLLVAVRD+WDSHVLVINK+VP  WK+EPAGKILELSILHLAMSEM  LET HQIV
Sbjct: 189 RFTKKLLVAVRDTWDSHVLVINKIVPQNWKNEPAGKILELSILHLAMSEMEVLETRHQIV 248

Query: 252 INEAVDLAKRYCDGASSRIINGCLRTFYRDTE 283
           INEAVDLAKR+CDGA+ RIINGCLRTF+R+ E
Sbjct: 249 INEAVDLAKRFCDGAAPRIINGCLRTFFRELE 280