Miyakogusa Predicted Gene

Lj4g3v0408380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0408380.1 Non Chatacterized Hit- tr|D7KNJ5|D7KNJ5_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,28.97,3e-18,seg,NULL,CUFF.47053.1
         (348 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g14270.1                                                       344   9e-95
Glyma05g31060.1                                                       268   6e-72
Glyma18g18870.1                                                       214   1e-55
Glyma08g39820.1                                                       137   3e-32

>Glyma08g14270.1 
          Length = 356

 Score =  344 bits (882), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 231/352 (65%), Gaps = 32/352 (9%)

Query: 1   MESESKQVKQHEMEVLDILKEAVKVYVKNINFITFTIVTSLPFFCVMIYFELLFQKTVVE 60
           MESESKQVKQ ++ VLDILKEAV  YV NINFI FT + SLPFF VM+YFE+LFQ+T+VE
Sbjct: 1   MESESKQVKQ-KLGVLDILKEAVTFYVSNINFIIFTFLNSLPFFFVMLYFEILFQQTIVE 59

Query: 61  ASEFLSQKTADETVEVISLLLSEDKADFNYVHELGSFI-----------DKIFSKDYLPV 109
             E  S    +E              + + +++ G+ I           DK FSKDYLPV
Sbjct: 60  TPEIFSLLPFNE---------RNHAYELDVIYDYGTNIPSRSFRKNYLPDKSFSKDYLPV 110

Query: 110 LIQLGFIYLVPLQVLELCSAILTMDLASKLRSGDNNLSLTLKQMFQNSIIDISIMKGTFI 169
           LI LGFIYLVPL VLELCSA++TMD ASKL S +NN+S+    MF+ SI DISIMKGTFI
Sbjct: 111 LILLGFIYLVPLHVLELCSAVVTMDSASKLYSEENNMSVM--DMFKRSI-DISIMKGTFI 167

Query: 170 TSLYMLFLSAYLLITFPWTLNNFYCLSEAFGDYIFSAIISLVCCLVLAKLLMVYLEWSSI 229
           TSLYMLF S  LLI FPW   N Y L    G YIF A+I   C LV  KLL VYLEWS+I
Sbjct: 168 TSLYMLFWSTCLLIAFPWMAGNCYVLFRDLGYYIFFAVI---CFLVFVKLLKVYLEWSAI 224

Query: 230 LNMSIVISVLDGIYGFGALRVSYAFSRGNQKRXXXXXXXXXXXXXXXXXXXXXXESYERG 289
            NMS VISV+DGIYG GALRVSY  SRGNQKR                        Y+ G
Sbjct: 225 WNMSFVISVVDGIYGIGALRVSYYLSRGNQKRGLLVMLVFFALGLCLRLSCVSLGCYKGG 284

Query: 290 IGIFVQIGVLTVVNTLKWVSCMIYFYDCKKRTMEKKVDEELGKAIEEWILQV 341
            GIFVQIG+L V+NTLKW+SCMIYF DCK+R M+KKVDEE      EW L++
Sbjct: 285 YGIFVQIGLLAVLNTLKWLSCMIYFSDCKERKMQKKVDEE-----SEWNLEI 331


>Glyma05g31060.1 
          Length = 244

 Score =  268 bits (685), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 184/336 (54%), Gaps = 92/336 (27%)

Query: 1   MESESKQVKQHEMEVLDILKEAVKVYVKNINFITFTIVTSLPFFCVMIYFELLFQKTVVE 60
           MESESKQVKQ ++ VLDILKEAV  Y  NINFI FT +TSLPFF VM+YFE         
Sbjct: 1   MESESKQVKQ-KLGVLDILKEAVTFYASNINFIIFTFLTSLPFFFVMVYFETF------- 52

Query: 61  ASEFLSQKTADETVEVISLLLSEDKADFNYVHELGSFIDKIFSKDYLPVLIQLGFIYLVP 120
                                                      +DYLPVLIQLGFIYLVP
Sbjct: 53  -------------------------------------------EDYLPVLIQLGFIYLVP 69

Query: 121 LQVLELCSAILTMDLASKLRSGDNNLSLTLKQMFQNSIIDISIMKGTFITSLYMLFLSAY 180
           L VL LCSA++TMD ASKLRS +NN+S  LK MF+ S IDISIMKGTFITSLYMLF S+ 
Sbjct: 70  LHVLGLCSAVVTMDSASKLRSEENNIS--LKDMFKRS-IDISIMKGTFITSLYMLFWSSC 126

Query: 181 LLITFPWTLNNFYCLSEAFGDYIFSAIISLVCCLVLAKLLMVYLEWSSILNMSIVISVLD 240
           LLI FPWT+NN Y     F                                      V+D
Sbjct: 127 LLIAFPWTVNNCYIFFRGF--------------------------------------VVD 148

Query: 241 GIYGFGALRVSYAFSRGNQKRXXXXXXXXXXXXXXXXXXXXXXESYERGIGIFVQIGVLT 300
           GIY  GALRVSY  S GNQKR                      E Y+ G GIFVQIG+LT
Sbjct: 149 GIYAIGALRVSYYLSTGNQKRGLLLMLVFFALGLCLRLSCVSLECYKGGYGIFVQIGLLT 208

Query: 301 VVNTLKWVSCMIYFYDCKKRTMEKKVDEELGKAIEE 336
           V+NTLKWVSCMIYF DCK+R MEKKVDEE GK + +
Sbjct: 209 VLNTLKWVSCMIYFSDCKERKMEKKVDEESGKDLAK 244


>Glyma18g18870.1 
          Length = 298

 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/337 (39%), Positives = 188/337 (55%), Gaps = 42/337 (12%)

Query: 1   MESESKQVKQ-HEMEVLDILKEAVKVYVKNINFITFTIVTSLPFFCVMIYFELLFQKTVV 59
           MESES + KQ  ++EV DIL E+V +Y +N+NFI FT +TS+P F    Y          
Sbjct: 1   MESESNKSKQKQKLEVSDILWESVVIYFRNLNFIIFTFLTSIPLFFFTDY---------- 50

Query: 60  EASEFLSQKTADETVEVISLLLSEDKADFNYVHELGSFIDKIFSKDYLPVLIQLGFIYLV 119
                                   D  D+   +     ID+ F+KDY+  LI  GFIY+V
Sbjct: 51  ------------------------DFIDYRNSYRPDLIIDR-FNKDYVLKLILTGFIYMV 85

Query: 120 PLQVLELCSAILTMDLASKLRSGDNNLSLTLKQMFQNSIIDISIMKGTFITSLYMLFLSA 179
           PL VLE  SAI+T+ LASKL S +  +  TLK+M Q    D+S ++G+F+TS+Y+LFL+ 
Sbjct: 86  PLYVLEFVSAIVTIALASKLHSKEKKM--TLKEMVQKPF-DLSKLRGSFVTSVYVLFLTT 142

Query: 180 YLLITFPWTLNNFYCLSEAFGDYIFSAIISLVCCLVLAKLLMVYLEWSSILNMSIVISVL 239
              +   + + N++       D  F  + +++C    AK+L +YLEWS++ NMS+V+SVL
Sbjct: 143 THQLGLLFIVLNYHVY---LKDSSFYLLFAVICSAAFAKVLRMYLEWSAMWNMSLVMSVL 199

Query: 240 DGIYGFGALRVSYAFSRGNQKRXXXXXXXXXXXXXXXXXXXXXXESYERGIGIFVQIGVL 299
           +GIYG  AL VS  FSRG  +R                        YE+G  IFVQ+G+ 
Sbjct: 200 EGIYGVDALAVSAYFSRGCHRRGLFLMLIFFAWGHLLRLSCYHIGGYEQGNAIFVQVGLY 259

Query: 300 TVVNTLKWVSCMIYFYDCKKRTMEKKVDEELGKAIEE 336
            +VN LKWV+CMIY +DCK+R +EKK DEE GK ++ 
Sbjct: 260 CMVNPLKWVACMIYVHDCKERKLEKKADEESGKDVKN 296


>Glyma08g39820.1 
          Length = 227

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/194 (40%), Positives = 111/194 (57%), Gaps = 20/194 (10%)

Query: 128 SAILTMDLASKLRSGDNNLSLTLKQMFQNSIIDISIMKGTFITSLYMLFLSAYLLITFPW 187
           SAI+T+ LASKL S +  +  TLK+M Q    D+S ++G+F+TS+Y+LFL+         
Sbjct: 52  SAIITITLASKLHSKEKKM--TLKEMVQKPF-DLSKLRGSFVTSVYVLFLTT-------- 100

Query: 188 TLNNFYCLSEAFG-DYIFSAIISLVCCLVLAKLLMVYLEWSSILNMSIVISVLDGIYGFG 246
                   +   G  +IF  ++   C +  AK+L +YLEWS++ NMS+VISVL+GIYG  
Sbjct: 101 --------THQLGLRFIFLRVVRGNCSVAFAKVLRMYLEWSAMWNMSLVISVLEGIYGVD 152

Query: 247 ALRVSYAFSRGNQKRXXXXXXXXXXXXXXXXXXXXXXESYERGIGIFVQIGVLTVVNTLK 306
           A   S  FSRG  +R                        YE+G  IFVQ+G+  +VN LK
Sbjct: 153 AFSSSTYFSRGCHRRGLFLMMIFFAWGHLLRLPCYHVGGYEQGNAIFVQVGLFCMVNPLK 212

Query: 307 WVSCMIYFYDCKKR 320
           WV+CMIYF+DCK+R
Sbjct: 213 WVACMIYFHDCKER 226