Miyakogusa Predicted Gene

Lj4g3v0386170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0386170.1 Non Chatacterized Hit- tr|G7IS69|G7IS69_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,50.89,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING
2/NUR77,NU,CUFF.47059.1
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30160.1                                                       136   8e-33
Glyma08g07150.1                                                       133   6e-32
Glyma13g32930.1                                                       119   7e-28
Glyma13g32930.2                                                       119   1e-27
Glyma08g27030.1                                                        49   2e-06

>Glyma07g30160.1 
          Length = 141

 Score =  136 bits (342), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 72/94 (76%)

Query: 46  TMAQGMALGTGSAIAHRAMDAVMGPRVVQXXXXXXXXXXXXXXXXXXXFGGDACGIHTKA 105
           T+AQGMA GTGSA+AHRA+DAVMGPR +Q                   FGGDAC +HTKA
Sbjct: 47  TIAQGMAFGTGSAVAHRAVDAVMGPRTIQHEAVVTEAAAAAPAPTANTFGGDACNVHTKA 106

Query: 106 FQDCINSYGADISKCQFYMDMLAECRKNSGSSLS 139
           FQDC+NSYG+D+SKCQFYMDMLAECRKNSG+SLS
Sbjct: 107 FQDCLNSYGSDLSKCQFYMDMLAECRKNSGASLS 140


>Glyma08g07150.1 
          Length = 141

 Score =  133 bits (335), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 63/94 (67%), Positives = 70/94 (74%)

Query: 46  TMAQGMALGTGSAIAHRAMDAVMGPRVVQXXXXXXXXXXXXXXXXXXXFGGDACGIHTKA 105
           T+AQGMA GTGSA+AHRA+DAVMGPR +Q                   FGGDAC IHTKA
Sbjct: 47  TIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETVVTEAAAAAPAPTANTFGGDACSIHTKA 106

Query: 106 FQDCINSYGADISKCQFYMDMLAECRKNSGSSLS 139
           FQDC+N YG DISKCQFYMDMLAECRKNSG++LS
Sbjct: 107 FQDCLNGYGNDISKCQFYMDMLAECRKNSGATLS 140


>Glyma13g32930.1 
          Length = 137

 Score =  119 bits (299), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 3/95 (3%)

Query: 46  TMAQGMALGTGSAIAHRAMDAVMGPRVVQXXXXXXXXXXXXXXXXXXXFGGDACGIHTKA 105
           T+A+G+A G+GSA+AHRA+D+V GPR +Q                    GGDAC +H KA
Sbjct: 46  TVAEGLAFGSGSAVAHRAVDSVFGPRTIQHEVAATGPPPASAANK---LGGDACNVHAKA 102

Query: 106 FQDCINSYGADISKCQFYMDMLAECRKNSGSSLSA 140
           FQDC+NSY +DISKCQFY++MLAECR+NSG++LSA
Sbjct: 103 FQDCLNSYESDISKCQFYINMLAECRRNSGATLSA 137


>Glyma13g32930.2 
          Length = 130

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 3/95 (3%)

Query: 46  TMAQGMALGTGSAIAHRAMDAVMGPRVVQXXXXXXXXXXXXXXXXXXXFGGDACGIHTKA 105
           T+A+G+A G+GSA+AHRA+D+V GPR +Q                    GGDAC +H KA
Sbjct: 39  TVAEGLAFGSGSAVAHRAVDSVFGPRTIQHEVAATGPPPASAANK---LGGDACNVHAKA 95

Query: 106 FQDCINSYGADISKCQFYMDMLAECRKNSGSSLSA 140
           FQDC+NSY +DISKCQFY++MLAECR+NSG++LSA
Sbjct: 96  FQDCLNSYESDISKCQFYINMLAECRRNSGATLSA 130


>Glyma08g27030.1 
          Length = 107

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 29/62 (46%)

Query: 47  MAQGMALGTGSAIAHRAMDAVMGPRVVQXXXXXXXXXXXXXXXXXXXFGGDACGIHTKAF 106
           +A+G+  G GSA+AHR +D V  PR +Q                     GD C   TKAF
Sbjct: 32  VAEGITFGIGSAVAHRIVDLVFDPRSIQHETIVNGPVVVVTTPMTNSLSGDTCNAPTKAF 91

Query: 107 QD 108
           QD
Sbjct: 92  QD 93