Miyakogusa Predicted Gene

Lj4g3v0109430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0109430.1 Non Chatacterized Hit- tr|Q8L8V8|Q8L8V8_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,45.26,3e-18,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.46427.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g00980.1                                                       207   6e-54
Glyma07g39800.1                                                       145   2e-35
Glyma09g01640.1                                                        61   7e-10

>Glyma17g00980.1 
          Length = 176

 Score =  207 bits (527), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 115/185 (62%), Positives = 129/185 (69%), Gaps = 14/185 (7%)

Query: 1   MMSYIRGCHAXXXXXXXXXXXXXXXXWVAGQEEQVSLMLQLSSRDEVVQMAGYGEEKLST 60
           MM+Y  GCH                   A  E+   L+  LSSRDEVVQ+AGYGEEKLST
Sbjct: 1   MMNYFCGCHGLVIILVLIASP-------AEGEDNHPLLELLSSRDEVVQIAGYGEEKLST 53

Query: 61  VLITGSVNCQARFHNGDQPHAWPIPGAWVGVHCHSSASERK---GKSMEVRGVTDEFGDF 117
           VLITGSV C+A      QPHAWPI GA VGV+C S     K   GKSM   GVTDEFGDF
Sbjct: 54  VLITGSVTCEAPHR--PQPHAWPIQGASVGVNCKSHGRNNKWNKGKSMVATGVTDEFGDF 111

Query: 118 MVDLPSHLHSIPNLENICVVKVHRIPKGSLCQPAHV-KKHKGVLELSSIGNGIRTYDAGS 176
           M+DLPSHLH+IPNLE +C+VK+HRIPK SLC+PAHV KKHKG L LSS GNGIRTY+AG+
Sbjct: 112 MIDLPSHLHAIPNLEKVCIVKIHRIPKASLCRPAHVIKKHKG-LTLSSFGNGIRTYNAGN 170

Query: 177 IRILH 181
           IRI H
Sbjct: 171 IRIQH 175


>Glyma07g39800.1 
          Length = 147

 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 102/182 (56%), Gaps = 38/182 (20%)

Query: 1   MMSYIRGCHAXXXXXXXXXXXXXXXXWVAGQEEQVSLMLQLSSRDEVVQMAGYGEEKLST 60
           MMSY  G HA                  A  E    L+  LSSRDEVVQ+AGYGEEKLST
Sbjct: 2   MMSYFCGWHALAILVLIASP--------AAGENNHPLLELLSSRDEVVQIAGYGEEKLST 53

Query: 61  VLITGSVNCQARFHNGDQPHAWPIPGAWVGVHCHSSASERKGKSMEVRGVTDEFGDFMVD 120
           VLITGSVNC+A      QPHAWP+ GA V V+C S   + KGKSM               
Sbjct: 54  VLITGSVNCEAPHQPQPQPHAWPVQGASVAVNCQSHGRKWKGKSM--------------- 98

Query: 121 LPSHLHSIPNLENICVVKVHRIPKGSLCQPAHV-KKHKGVLELSSIGNGIRTYDAGSIRI 179
                        +C VK+HRIPK SLC+ AHV KKHKG L LSS GNG RTY+AG+IRI
Sbjct: 99  -------------VCTVKIHRIPKASLCRAAHVMKKHKG-LTLSSFGNGFRTYNAGNIRI 144

Query: 180 LH 181
            H
Sbjct: 145 QH 146


>Glyma09g01640.1 
          Length = 43

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 31/42 (73%)

Query: 105 MEVRGVTDEFGDFMVDLPSHLHSIPNLENICVVKVHRIPKGS 146
           M    VTDEFG F+VDLPS LH+IPNLE IC VK+   PKGS
Sbjct: 1   MVANAVTDEFGGFIVDLPSRLHAIPNLEKICRVKILWSPKGS 42