Miyakogusa Predicted Gene

Lj3g3v3527450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527450.1 Non Chatacterized Hit- tr|F6I128|F6I128_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.88,0.0000000000004,seg,NULL,CUFF.45952.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02770.1                                                        72   3e-13
Glyma11g10470.1                                                        60   6e-10

>Glyma12g02770.1 
          Length = 1161

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 34  RMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFXX-XXXXXXXXXXXXXXXXXXX 92
           R+ DEL+   +D   QSFLATIETLSS LDAS+D+LNF                      
Sbjct: 561 RISDELIFAFMDNICQSFLATIETLSSVLDASEDILNFLACQAELLLQLTRTVCKSLSLH 620

Query: 93  XXXXXXKCATSGLKILSELKLVPSEAXXXXXXXXXXXXXXXXXXXXXXHSGGATNKSSG 151
                 KCA+SGLK+LS LK +PSEA                      HS GAT++SSG
Sbjct: 621 VSLLVLKCASSGLKLLSALKPLPSEANLIMKLLLTLLLSVLQSDSLNAHSDGATDESSG 679


>Glyma11g10470.1 
          Length = 652

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 28  RAATGERMPDELMITCIDITSQSFLATIETLSSALDASQDMLNFXX-XXXXXXXXXXXXX 86
           RA TG R+      T +D   QSFLAT+ETLSSALDAS+D+LNF                
Sbjct: 118 RATTGGRI-----FTFMDNICQSFLATVETLSSALDASEDILNFLACQVELLLQLTRTVF 172

Query: 87  XXXXXXXXXXXXKCATSGLKILSELKLVPSEA 118
                       KC++SGLK+ S LK +PSEA
Sbjct: 173 KSLALHVSLLVLKCSSSGLKLFSALKPLPSEA 204