Miyakogusa Predicted Gene

Lj3g3v3338560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3338560.1 Non Chatacterized Hit- tr|Q9SZ07|Q9SZ07_ARATH
Putative uncharacterized protein AT4g34420
OS=Arabidop,52.08,3e-17,seg,NULL,CUFF.45661.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g04840.1                                                        82   2e-16
Glyma11g12640.1                                                        79   2e-15
Glyma15g39310.1                                                        56   2e-08
Glyma18g41210.1                                                        53   2e-07

>Glyma12g04840.1 
          Length = 883

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 81/132 (61%), Gaps = 15/132 (11%)

Query: 1   MEEKRRETASQPPPTTDSPASEPVPPRRRAGGNKRK---ASASNPSSIPSKRATREKASP 57
           MEEKRR+ A       DSPASEP   RRRAG NKRK    SAS  SS PSKRA R+KASP
Sbjct: 1   MEEKRRDAAPS---AADSPASEPATSRRRAGANKRKFGTLSASGSSSAPSKRAARDKASP 57

Query: 58  IHFPPL-HNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGESSALA 116
           + FPP  HNGPLTRARQ P+NL                 VK SERA        ES+ALA
Sbjct: 58  L-FPPAPHNGPLTRARQTPNNL----SASSSAAASAPAAVKRSERAHPS---AAESTALA 109

Query: 117 EMLKKESEWESL 128
           E LKKESEWE+L
Sbjct: 110 EQLKKESEWETL 121


>Glyma11g12640.1 
          Length = 1001

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/131 (54%), Positives = 81/131 (61%), Gaps = 12/131 (9%)

Query: 1   MEEKRRETASQPPPTTDSPASEPVPPRRRAGGNKRKASASNPSSIPS---KRATREKASP 57
           MEEKRR+ A       DSPASEP   RRRAG NKRK+ A + S   S   KRA+R+KASP
Sbjct: 1   MEEKRRDAAPS---AADSPASEPATSRRRAGANKRKSGALSASGSSSAPSKRASRDKASP 57

Query: 58  IHFPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGESSALAE 117
           +H PPLHNGPLTRARQ P+NL                 VK SERA        ES+ALAE
Sbjct: 58  LHPPPLHNGPLTRARQTPNNL---ASASSSAGASAPAAVKRSERA---HPSAAESAALAE 111

Query: 118 MLKKESEWESL 128
            LKKESEWE+L
Sbjct: 112 QLKKESEWETL 122


>Glyma15g39310.1 
          Length = 162

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 26/77 (33%)

Query: 52  REKASPIHFPPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGE 111
           R+KASP+H PPLHNGPLTRA Q P+N                          +      E
Sbjct: 39  RDKASPLHPPPLHNGPLTRAHQTPNN--------------------------RTHPSAAE 72

Query: 112 SSALAEMLKKESEWESL 128
           S+ L E LKKESEWE+L
Sbjct: 73  SATLTEQLKKESEWETL 89


>Glyma18g41210.1 
          Length = 98

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 54/128 (42%), Gaps = 50/128 (39%)

Query: 1   MEEKRRETASQPPPTTDSPASEPVPPRRRAGGNKRKASASNPSSIPSKRATREKASPIHF 60
           MEEKRR+ A  P PT                            S+P     R+KAS +H 
Sbjct: 1   MEEKRRDAA--PSPT----------------------RGCLTPSMPPVPPPRDKASSLHP 36

Query: 61  PPLHNGPLTRARQIPSNLXXXXXXXXXXXXXXXXXVKHSERASQGQGLGGESSALAEMLK 120
           PPLHNGPLTRARQ P+N                          +      ES+ LAE LK
Sbjct: 37  PPLHNGPLTRARQTPNN--------------------------RAHPSAAESAMLAEQLK 70

Query: 121 KESEWESL 128
           KESEWE+L
Sbjct: 71  KESEWETL 78