Miyakogusa Predicted Gene

Lj3g3v3200860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3200860.1 tr|B9HPH5|B9HPH5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_768209 PE=4
SV=1,32.68,1e-18,seg,NULL; DUF4378,Domain of unknown function
DUF4378,gene.g50434.t1.1
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g04320.1                                                       132   3e-31
Glyma13g41090.1                                                       132   3e-31
Glyma20g19550.1                                                        57   1e-08
Glyma03g19480.1                                                        50   2e-06

>Glyma15g04320.1 
          Length = 618

 Score =  132 bits (332), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 9/171 (5%)

Query: 38  DADKDPNFKCVKDVFGFLCFMGYEDIQMWHXXXXXXXXXXXXXXMDLEVSLCNKIESCGE 97
           D D   NFK VK+V  F  F+G E  Q  +               DL+ +LC++IE   E
Sbjct: 452 DTDNTSNFKYVKNVLEFSGFLGNEHTQKRYTVDQPLKPSIF---QDLDATLCHEIEPS-E 507

Query: 98  ETINPYHYQLLFSVVKEVVYEIYEGSPIHFPKHY-FNRCLYSMHREHYLLHEVWTRVNSY 156
           ETI+   +QLLF++V EV+ EIY  SP +FP+ + FN   + M + +YLL EVW  VNSY
Sbjct: 508 ETIS---HQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRFHPMPKGNYLLDEVWNSVNSY 564

Query: 157 LSLRISEQDHSIDAVVGQDLAKRSGWVKFQQEEEHAVLELEGMIVDDLLNE 207
           L+LR  E D +++ V+G+DLAK  GW+  Q+EEE+  LELE MI+DDLL+E
Sbjct: 565 LTLR-PELDQTLEDVIGRDLAKGKGWMILQEEEEYVALELEEMIMDDLLDE 614


>Glyma13g41090.1 
          Length = 534

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 109/171 (63%), Gaps = 8/171 (4%)

Query: 38  DADKDPNFKCVKDVFGFLCFMGYEDIQMWHXXXXXXXXXXXXXXMDLEVSLCNKIESCGE 97
           D D   +FK VK++  F  ++  E  QM +               DL+ +L ++IE   E
Sbjct: 367 DTDNTSDFKYVKNILEFSGYLRNEHTQMPYTVDQPLKPSIFK---DLDATLRHEIEPSEE 423

Query: 98  ETINPYHYQLLFSVVKEVVYEIYEGSPIHFPKHY-FNRCLYSMHREHYLLHEVWTRVNSY 156
           ETIN   +QLLF++V EV+ EIY  SP +FP+ + FN  L+SM + +YLL+EVW  VNSY
Sbjct: 424 ETIN---HQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHSMPKGNYLLNEVWNSVNSY 480

Query: 157 LSLRISEQDHSIDAVVGQDLAKRSGWVKFQQEEEHAVLELEGMIVDDLLNE 207
           L+L+  E D ++D VVG+DLAK  GW+  Q+EEE+  LELE MI+D+LL+E
Sbjct: 481 LNLK-PELDQTLDDVVGRDLAKGKGWMILQEEEEYVALELEEMIMDELLDE 530


>Glyma20g19550.1 
          Length = 608

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 24/186 (12%)

Query: 35  IKPDADKDPNFKCVKDVFGFLCFMGYEDIQMWHXXXXXXXXXXXXXXMDLEVSLCNKIES 94
           I+ D   +  F  V+ V     F G++ + +W+                L+ S+  ++E 
Sbjct: 434 IEVDPSNEAAFNYVRKVLELSGFTGHDSLGIWYSDN-----------QPLDPSMYEELEG 482

Query: 95  C---------GEETINPYHYQLLFSVVKEVVYEIYEGSPIHFPK--HYFNRCLYSMHREH 143
           C           E     H+ LLF ++ E + EI+  S  ++P+   Y +  ++ +    
Sbjct: 483 CLLLDPDCSRNSEGGECNHHLLLFDIINEGLLEIFGRSYNYYPRPLSYLSH-VHPLPSGE 541

Query: 144 YLLHEVWTRVNSYL-SLRISEQDHSIDAVVGQDLAKRSGWVKFQQEEEHAVLELEGMIVD 202
            +L +VWT ++ YL +   SE   S+D  V +DLAK  GW+  Q + E   LEL+ +I +
Sbjct: 542 NVLCKVWTLISWYLMNSTTSELYLSLDYYVSKDLAKYDGWMNLQFDSECVGLELDDLIFE 601

Query: 203 DLLNEV 208
           DLL E+
Sbjct: 602 DLLEEI 607


>Glyma03g19480.1 
          Length = 356

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 10/166 (6%)

Query: 45  FKCVKDVFGFLCFMGYEDIQMWHXXXXXXXXXXXXXXMDLEVSLCNKIESCGEETINPYH 104
           F  VK +      +G + I  WH              M+ +   CN     G    N   
Sbjct: 192 FNYVKYILEISGLIGKDSISAWHSSDHPVDPLLYEE-MEGDPDFCNY---GGSGQCN--- 244

Query: 105 YQLLFSVVKEVVYEIYEGSPIHFPKHYFNRCLYS--MHREHYLLHEVWTRVNSYLSLRIS 162
           + +LF ++ E + E+   S  +      +   Y+  + +  + LH+VWT +   L LR S
Sbjct: 245 HHVLFDLINETLLELSGRSYCYCSIPLSSSLPYTHPISKGCHPLHQVWTHMRKSLCLR-S 303

Query: 163 EQDHSIDAVVGQDLAKRSGWVKFQQEEEHAVLELEGMIVDDLLNEV 208
           E   +ID  V +DLA+  GWV  Q   +   LELE +I+ DLL E+
Sbjct: 304 EVGLTIDDHVSRDLARLDGWVNPQLFAQCVSLELEDLILHDLLEEI 349