Miyakogusa Predicted Gene
- Lj3g3v2737550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2737550.1 Non Chatacterized Hit- tr|D8T2L7|D8T2L7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,47.87,0.0000000000001,seg,NULL; 39S RIBOSOMAL PROTEIN L18,
MITOCHONDRIAL,NULL; Ribosomal_L18p,Ribosomal protein L18/L5;
Tr,CUFF.44563.1
(114 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g47730.1 169 6e-43
Glyma14g00900.2 166 6e-42
Glyma14g00900.1 166 6e-42
Glyma08g25990.1 55 1e-08
Glyma12g00280.1 54 5e-08
Glyma06g46620.2 52 1e-07
Glyma06g46620.1 52 1e-07
Glyma04g14470.2 52 1e-07
Glyma04g14470.1 52 1e-07
>Glyma02g47730.1
Length = 114
Score = 169 bits (428), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/102 (82%), Positives = 88/102 (86%)
Query: 13 TKFLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKV 72
T+FLKPYVL+MHFTNK VSAQVIH QEKALRSSLETSRDVAAAAKIGK+
Sbjct: 13 TQFLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETSRDVAAAAKIGKI 72
Query: 73 LAERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114
LAERLL KDIPAVSVHLKREQKYHGKVKAVIDS+REAGVKLL
Sbjct: 73 LAERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVKLL 114
>Glyma14g00900.2
Length = 114
Score = 166 bits (419), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 88/102 (86%)
Query: 13 TKFLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKV 72
T+FLKPYVL+M+FTNK VSAQVIH QEKALRSSLETSRDVAAAAKIGK+
Sbjct: 13 TQFLKPYVLKMNFTNKYVSAQVIHSPTATVASSASSQEKALRSSLETSRDVAAAAKIGKI 72
Query: 73 LAERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114
LAERLL K+IPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL
Sbjct: 73 LAERLLLKNIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114
>Glyma14g00900.1
Length = 114
Score = 166 bits (419), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 88/102 (86%)
Query: 13 TKFLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKV 72
T+FLKPYVL+M+FTNK VSAQVIH QEKALRSSLETSRDVAAAAKIGK+
Sbjct: 13 TQFLKPYVLKMNFTNKYVSAQVIHSPTATVASSASSQEKALRSSLETSRDVAAAAKIGKI 72
Query: 73 LAERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114
LAERLL K+IPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL
Sbjct: 73 LAERLLLKNIPAVSVHLKREQKYHGKVKAVIDSLREAGVKLL 114
>Glyma08g25990.1
Length = 197
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 56/97 (57%)
Query: 15 FLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKVLA 74
+++P++L + F+ + + A+V+H K LR+SL + D A +G ++A
Sbjct: 98 YMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACRVVGNLIA 157
Query: 75 ERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGV 111
ER + D+ AV+ +++++ G++ V+D+++E G+
Sbjct: 158 ERSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGI 194
>Glyma12g00280.1
Length = 197
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 56/97 (57%)
Query: 15 FLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKVLA 74
+++P++L + F+ + + A+V+H K LR+SL + D A +G ++A
Sbjct: 98 YMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACRVVGNLIA 157
Query: 75 ERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGV 111
+R + D+ AV+ +++++ G++ V+D+++E G+
Sbjct: 158 QRSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGI 194
>Glyma06g46620.2
Length = 202
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 15 FLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKVLA 74
+++P+ L + + + VSA + H K +++ L + D+ A IG++LA
Sbjct: 99 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILA 158
Query: 75 ERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
ER D+ S + K+ GK++AV+ SL + G+ +
Sbjct: 159 ERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 197
>Glyma06g46620.1
Length = 202
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 15 FLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKVLA 74
+++P+ L + + + VSA + H K +++ L + D+ A IG++LA
Sbjct: 99 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILA 158
Query: 75 ERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
ER D+ S + K+ GK++AV+ SL + G+ +
Sbjct: 159 ERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 197
>Glyma04g14470.2
Length = 148
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 15 FLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKVLA 74
+++P+ L + + + VSA + H K +++ L + D+ A IG++LA
Sbjct: 45 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILA 104
Query: 75 ERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
ER D+ S + K+ GK++AV+ SL + G+ +
Sbjct: 105 ERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 143
>Glyma04g14470.1
Length = 187
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 15 FLKPYVLRMHFTNKNVSAQVIHXXXXXXXXXXXXQEKALRSSLETSRDVAAAAKIGKVLA 74
+++P+ L + + + VSA + H K +++ L + D+ A IG++LA
Sbjct: 84 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILA 143
Query: 75 ERLLFKDIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
ER D+ S + K+ GK++AV+ SL + G+ +
Sbjct: 144 ERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDI 182