Miyakogusa Predicted Gene
- Lj3g3v2576350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2576350.1 Non Chatacterized Hit- tr|I1NFA1|I1NFA1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,31.27,3e-17,DNA-binding pseudobarrel domain,DNA-binding
pseudobarrel domain; B3,B3 DNA binding domain; seg,NULL;,CUFF.44242.1
(487 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g42770.1 119 7e-27
Glyma20g24220.1 103 5e-22
Glyma20g24210.1 80 4e-15
Glyma10g42790.1 78 2e-14
Glyma09g20060.1 69 9e-12
Glyma10g42780.1 69 1e-11
Glyma08g44640.1 65 2e-10
Glyma18g30690.1 57 4e-08
Glyma01g11670.1 57 4e-08
Glyma09g20280.1 57 5e-08
Glyma19g27950.1 57 6e-08
Glyma16g05110.1 57 7e-08
Glyma07g19380.1 56 9e-08
Glyma20g24270.1 54 4e-07
Glyma09g18790.1 54 4e-07
Glyma17g36490.1 54 5e-07
Glyma20g24230.1 50 7e-06
Glyma14g08630.1 49 1e-05
Glyma08g44650.1 49 1e-05
>Glyma10g42770.1
Length = 277
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 43/303 (14%)
Query: 56 KKHGSDVIMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRGTQFKVRI-HESGLEIKYPG 114
KK +DV + D WK+F E YSLD++H L F + V ++F+V I +SGLE+ YP
Sbjct: 6 KKLDADVWLIDD-WKKFAEAYSLDLDHLLVFKY-----VGRSEFQVVILDQSGLEMSYP- 58
Query: 115 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGSSRRQKKREKSPLPFSXXXXXXXX 174
+G+S Q KR SPLPFS
Sbjct: 59 ------------------------LTEATLDGEDNGNSLPQSKRASSPLPFSPSTKKVKT 94
Query: 175 XXXXXXXXSYHRQHAGTESQRVMSENNTNPKKTGKRGI------SQAKGGWSEEEPLKDS 228
+Y Q E++ S+ N K+ G+R + S++K EE L+++
Sbjct: 95 NTRKETN-AYPLQDEDVETKCAQSKRNKAKKRGGRRVMYANRRFSKSKA-IQNEELLQNT 152
Query: 229 RISSADKAVSS--SENVIIRCTMHRSYIERNTMSMPGRFVPAHLHKEEGNAILWVAE-KS 285
S+A + + SEN MH+SYI+ + ++MPG F+ KE + LW++E ++
Sbjct: 153 ESSTALERANYFHSENPFFIREMHKSYIKYHILAMPGNFITEDQQKENDHVFLWISEERT 212
Query: 286 WDVRFKLNQSSNQFSLTTGWKKFQEENTLKKGDKCVLTQMNSEKLSYSVEIERAKRASSP 345
W+V+F N+ S Q L GW +F ++N LK GD CV Q+ +S+ V I R + SS
Sbjct: 213 WNVKFYPNRCSGQIILGAGWMEFLKDNNLKIGDLCVFEQIKKPGISFRVVIFRDREQSSA 272
Query: 346 HLV 348
V
Sbjct: 273 SQV 275
>Glyma20g24220.1
Length = 246
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 133/325 (40%), Gaps = 94/325 (28%)
Query: 23 RMPRRFVSKHWINARISNPVALLL-PGERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
R+PR FV+K W +SNPV LLL G WKV WKK DV + D WKEF +F LD +
Sbjct: 1 RIPRSFVNKCW--EGMSNPVVLLLRNGAEWKVKWKKLDVDVWLI-DDWKEFADFCCLDQD 57
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHESGLEIKYPGRXXXXXXXXXXXXXXXXXXXXXXXXXX 141
H L F + SR + F +++GLE++YP
Sbjct: 58 HLLVFKYMGKSRFQVVIF----YQNGLEMQYP---------------------------- 85
Query: 142 XXXXXXVHGSSRRQKKREKSPLPFSXXXXXXXXXXXXXXXXSYHRQHAGTESQRVMSENN 201
+ G+S Q KR KSPLPFS + +
Sbjct: 86 -LMEETIDGNSLCQPKRAKSPLPFSSS----------------------------IKKVK 116
Query: 202 TNPKKTGKRG-----ISQAKGGWSEEEPLKDSRISSA---DKAVSSSENVIIRCTMHRSY 253
TNP+K RG + +E L+D+ S+A KA + IR M +SY
Sbjct: 117 TNPRKEPSRGRRRRIMCSNSRAIKRDELLQDTESSTALERAKAFRTDNPSFIR-AMGKSY 175
Query: 254 IERNTMSMPGRFVPAHLHKEEGNAILWVAEKSWDVRFKLNQSSNQFSLTTGWKKFQEENT 313
IER ++L ++ + + R SS Q L+ GW F ++N
Sbjct: 176 IER--------------------SVLAISLQKTNKRRMTIHSSGQILLSIGWMDFVKDNN 215
Query: 314 LKKGDKCVLTQMNSEKLSYSVEIER 338
LK G+ CV Q+ +S+ V I R
Sbjct: 216 LKIGNVCVFEQIKKPGISFRVVIFR 240
>Glyma20g24210.1
Length = 249
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 10/93 (10%)
Query: 23 RMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
R+PR FV+K W ISNPV LLLP G WKV WKK +D+++ D WKEF EF SLD +
Sbjct: 13 RIPRSFVNKCW--EGISNPVLLLLPNGVEWKVKWKKLDADILLIED-WKEFAEFCSLDKD 69
Query: 82 HSLWFSFRNDSRVRGTQFKVRIH-ESGLEIKYP 113
H L F + +R +QF V I ++GLE++YP
Sbjct: 70 HLLVFEY-----LRKSQFLVVIFDQNGLEMEYP 97
>Glyma10g42790.1
Length = 155
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 23 RMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
R+PR FV+K+W ISNPV LLLP G W V WKK +D+ + D WK+F EF SLD E
Sbjct: 13 RIPRSFVNKYW--EGISNPVLLLLPKGAEWNVKWKKLDADIWLI-DEWKKFAEFCSLDQE 69
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHESGLEIKYP 113
H L F + SR + F ++GLE++YP
Sbjct: 70 HLLVFKYVGKSRFQVVTFD----QNGLEMQYP 97
>Glyma09g20060.1
Length = 289
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 5 AIHFSKRIDECSLQKGVLRMPRRFVSKHWINARISNPVALLLP--GERWKVTWKKHGSDV 62
A+HF K I SL G+L +P++F K+ +SNPV L P G WK+ + KHG +
Sbjct: 13 AVHFVKIILTTSLADGIL-LPKKFTRKY--GDGMSNPV-FLKPADGTEWKIHYTKHGGE- 67
Query: 63 IMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRGTQFKVRIHE-SGLEIKYP 113
I F WKEF +YSLD H L+F + S F V I + S LEI YP
Sbjct: 68 IWFQKGWKEFATYYSLDHGHLLFFEYEGTS-----HFDVHIFDSSALEIDYP 114
>Glyma10g42780.1
Length = 171
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 24 MPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVEH 82
+PR FV+K W ISNPV L+LP G WKV WK+ DV + D WK+F + SLD +H
Sbjct: 24 IPRSFVNKCW--EGISNPVVLVLPNGAEWKVNWKRLDLDVWLI-DEWKKFAQVLSLDKDH 80
Query: 83 SLWFSFRNDSRVRGTQFKVRI-HESGLEIKYP 113
+ F + V +QF+V I +SGLE+ YP
Sbjct: 81 LMVFRY-----VGNSQFQVVILDQSGLEVGYP 107
>Glyma08g44640.1
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 98/263 (37%), Gaps = 21/263 (7%)
Query: 238 SSSENVIIRCTMHRSYIERNTMSMPGRFVPAHLHKEEGNAILWVAEKSWDVRFKLNQSSN 297
S+S+ + MH + + + +P FV + K N + + R L +
Sbjct: 16 SASKPIHFLRIMHPDNLLQGKLRLPAEFVNKY-GKHLSNTMFLKLPNGAEWRVNLEKRDG 74
Query: 298 QFSLTTGWKKFQEENTLKKGDKCV------------LTQMNSEKLSYSVEIERAKRAS-S 344
+ GWKKF E ++L G V + ++ ++ Y V KR S
Sbjct: 75 RVWFQEGWKKFVEHHSLAHGHLLVFKYDGTFHFHVLIFDPSANEIDYPVNKANHKRVRIS 134
Query: 345 PHLVQ-------EAEKRKQTRLQSNLAEGSGRGIAANVLDNDSEFPKMNSKRENQFTIIL 397
+Q KR + LQ N R M + FT+ +
Sbjct: 135 SEEIQPPTTCKTSGNKRSNSNLQDNAFHQKVRDHKGRYESPSEGKRNMEAAGSISFTVRM 194
Query: 398 KNTHMNEMKIPLGFIKKYVTDKVTSVVLRAKGRKWDAQLSYDPKDDSTAFSSGWSEFVRE 457
K++ M +P +K Y+ V L R W +L + S FS+ W F RE
Sbjct: 195 KSSSKQHMYLPKDSLKGYIKGGEQYVKLLVGERSWRVKLVHYKNRSSCFFSANWPAFARE 254
Query: 458 CHLKEGDQCVFDLVDKENFVLEV 480
LKEGD C F L++ F L++
Sbjct: 255 NDLKEGDACWFQLLNSSCFFLQI 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 2 SSKAIHFSKRIDECSLQKGVLRMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGS 60
+SK IHF + + +L +G LR+P FV+K+ +SN + L LP G W+V +K
Sbjct: 17 ASKPIHFLRIMHPDNLLQGKLRLPAEFVNKY--GKHLSNTMFLKLPNGAEWRVNLEKRDG 74
Query: 61 DVIMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRGT-QFKVRIHE-SGLEIKYP 113
V F + WK+F E +SL H L F + GT F V I + S EI YP
Sbjct: 75 RV-WFQEGWKKFVEHHSLAHGHLLVFKY------DGTFHFHVLIFDPSANEIDYP 122
>Glyma18g30690.1
Length = 232
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 4 KAIHFSKRIDECSLQKGVLRMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDV 62
K IHF K I ++ +G L +P +FV K+ R+ N + L P G WK+ KK
Sbjct: 12 KPIHFFKIITAHNVHEGKLMIPNKFVKKY--GKRLQNTLFLKTPNGAEWKMILKKRDGK- 68
Query: 63 IMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRGTQFKVRIHE-SGLEIKYP 113
I F WKEF E++SL H L F + S F+V I + S LEI+YP
Sbjct: 69 IWFQKGWKEFAEYHSLAHGHLLVFRWDVTS-----HFQVHIFDLSALEIEYP 115
>Glyma01g11670.1
Length = 213
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 16 SLQKGVLRMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTE 74
SLQ+G L +P +FV K+ + N + L P G WK+T +K D + F W+EF +
Sbjct: 6 SLQEGKLMLPNKFVEKY--GEGLPNTLFLKAPNGAEWKLTLEKR-DDKMWFQKGWREFAK 62
Query: 75 FYSLDVEHSLWFSFRNDSRVRGTQFKVRIHE-SGLEIKYP 113
+SLD H L F ++ R + F+V I + SGLEI+YP
Sbjct: 63 HHSLDHGHLLLFRYQ-----RTSHFQVHIFDGSGLEIEYP 97
>Glyma09g20280.1
Length = 197
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 23 RMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
++P +F ++ +N +SNPV L P G WK+ W KH D I F WKEF +YSL +
Sbjct: 1 KIPNKFTREYGVN--LSNPVFLKPPDGIEWKIFWTKHDGD-IWFQKGWKEFATYYSLSHK 57
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHESGLEIKYP 113
+ + F ++ S + F +S LE+ YP
Sbjct: 58 YLVLFKYQETSHLEVHIFD----QSALEVDYP 85
>Glyma19g27950.1
Length = 261
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 1 MSSKAIHFSKRIDECSLQKGVLRMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHG 59
+ K IHF K I +LQ G L +P ++V K+ + N + L P G W KK
Sbjct: 9 LQVKPIHFFKIITAQNLQDGKLMIPNKYVDKY--GEGLPNSLFLKTPNGTEWNFNLKKRD 66
Query: 60 SDVIMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRGTQFKVRIHE-SGLEIKYPGR 115
I F WKEF E++SL H L F R R + F+V I + S LEI YP +
Sbjct: 67 GK-IWFQKGWKEFAEYHSLAHGHLLVF-----RRHRTSHFQVHIFDLSALEIHYPSK 117
>Glyma16g05110.1
Length = 313
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 1 MSSKAIHFSKRIDECSLQKGVLRMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHG 59
+ K HF K I +LQ G L +P +FV K+ + N + L P G W +KH
Sbjct: 10 LQVKPFHFFKIITAQNLQDGKLMIPNKFVEKY--GEGLPNALFLKTPNGTEWNFNLEKHD 67
Query: 60 SDVIMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRGT-QFKVRIHE-SGLEIKYPGR 115
I F WKEF E++SL H L F R GT F+V I + S LEI YP +
Sbjct: 68 GK-IWFQKGWKEFAEYHSLAHGHLLVF------RRHGTSHFQVHIFDLSSLEIDYPSK 118
>Glyma07g19380.1
Length = 211
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 23 RMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
++P F +HW ISNPV L LP G + KV W K G DV F + W+EF + LDV
Sbjct: 1 KVPSSFTRRHW--QGISNPVILSLPNGTKRKVYWLKDGCDV-WFSNGWREFAKKLRLDVS 57
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHESGLEIKYP 113
H + F + +S F +S LE++YP
Sbjct: 58 HFVVFRYEGNSCFNVIIFG----KSALEVEYP 85
>Glyma20g24270.1
Length = 254
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 23 RMPRRFVSKHWINARISNPVAL-LLPGERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
++P +F SK+ + NPV + L G +WKV W K +V F WKEF E YSLD
Sbjct: 1 KIPNKFTSKY--GGGLPNPVFIKPLDGTQWKVNWTKQNGEV-WFEKGWKEFVEHYSLDHG 57
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHESGLEIKY 112
H ++F + S++ + + +S LEI Y
Sbjct: 58 HLIFFKYEGTSQID----VLILDQSALEIDY 84
>Glyma09g18790.1
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 38 ISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVEHSLWFSFRNDSRVRG 96
+SNPV+L P RWK+ W KH + I F WKE+ +Y LD H L+F + S
Sbjct: 1 MSNPVSLKSPDSTRWKIYWTKHDGE-IWFQKGWKEYATYYGLDHGHLLFFEYEGTS---- 55
Query: 97 TQFKVRIHE-SGLEIKYP 113
F V I + S +EI YP
Sbjct: 56 -HFNVHIFDTSAVEIDYP 72
>Glyma17g36490.1
Length = 407
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 220 SEEEPLKDSR---ISSADKAVSSSENVIIRCTMHRSYI-ERNTMSMPGRFVPAHLHKEEG 275
S P+ D I S KA + +++ + M S++ +R +SM G ++ H+
Sbjct: 250 SNRRPVTDDETKMIESLAKAACTEDSIYV--VMKPSHVYKRFFVSMRGTWIGKHISPSSQ 307
Query: 276 NAILWVAEKSWDVRFKLNQSSNQFSLTTGWKKFQEENTLKKGDKCVL---TQMNS 327
+ IL + + W R+ N N LT GWK F +N L++GD CV QMN+
Sbjct: 308 DVILRMGKGEWIARYSYNNIRNNGGLTGGWKHFSLDNNLEEGDACVFKPAGQMNN 362
>Glyma20g24230.1
Length = 200
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 23 RMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
++P +F +H R+SNPV + P G W+V W K +V F WKEF E Y L+
Sbjct: 1 QIPNKFTKRH--GDRLSNPVFMKPPDGTEWEVQWTKQNGEV-WFEKGWKEFVENYFLNHG 57
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHESGLEIKYP 113
H + F++ S++ + + + LEI YP
Sbjct: 58 HLVLFNYEGTSQIH----VLILDHTTLEIHYP 85
>Glyma14g08630.1
Length = 410
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 220 SEEEPLKDS---RISSADKAVSSSENVIIRCTMHRSYIERNTMSMPGRFVPAHLHKEEGN 276
S P+ D +I S KA + +++ + Y +R +S+ G ++ H+ +
Sbjct: 245 SNRRPVTDDETRKIESLAKAACTDDSIYVVMKPTHVY-KRFFVSIRGTWIGKHISPSSQD 303
Query: 277 AILWVAEKSWDVRFKLNQSSNQFSLTTGWKKFQEENTLKKGDKCVL 322
IL + + W R+ N N LT GWK F ++ L++GD CV
Sbjct: 304 VILRMGKGEWIARYSYNNIRNNGGLTGGWKHFSLDSNLEEGDACVF 349
>Glyma08g44650.1
Length = 271
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 23 RMPRRFVSKHWINARISNPVALLLP-GERWKVTWKKHGSDVIMFGDHWKEFTEFYSLDVE 81
R+P +FV K+ +SN + L LP G WKV +K V F + WK+F E+YSL
Sbjct: 5 RLPEKFVRKY--GNHLSNSMLLKLPNGIEWKVNLEKRDGSV-WFQEGWKDFAEYYSLANG 61
Query: 82 HSLWFSFRNDSRVRGTQFKVRIHE-SGLEIKYP 113
H L F + S F V I + S +EI+YP
Sbjct: 62 HLLGFRYDGTS-----HFHVFICDMSTMEIEYP 89