Miyakogusa Predicted Gene

Lj3g3v2317900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2317900.1 Non Chatacterized Hit- tr|E9CGW1|E9CGW1_CAPO3
Putative uncharacterized protein OS=Capsaspora owczarz,41.67,5e-19,no
description,NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
assembly factor 3; DUF498,NADH deh,CUFF.43837.1
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g24270.1                                                       288   2e-78
Glyma03g24270.3                                                       172   1e-43
Glyma03g24270.2                                                       150   5e-37

>Glyma03g24270.1 
          Length = 174

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 145/176 (82%), Positives = 161/176 (91%), Gaps = 10/176 (5%)

Query: 1   MSIKQR----LPNLIRTLRNEQPLKPQQNHA----LPSLRRAFSLYDQINVIDKLPDDQL 52
           M+++QR    LP L+RTLR E PLKP+ NHA    LPSLRRAFSLYDQIN+ID++P+DQL
Sbjct: 1   MAVRQRAVSALPTLLRTLRKE-PLKPR-NHAHVNALPSLRRAFSLYDQINLIDQVPEDQL 58

Query: 53  RFQGYSDTGFTVNRVEYEGSLLCVGNLLLSWKPNKFSEITADSLSLFQIVRPIPEILILG 112
           RFQGY+DTGFTVN VEYEGSLLCVGNLL+SWKP KFSEITADSLS+FQIVRPIPEILI+G
Sbjct: 59  RFQGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKKFSEITADSLSIFQIVRPIPEILIIG 118

Query: 113 CGRNIQPVDPELRKFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS 168
           CG+NIQ VDPELR+FIRSTG+KLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS
Sbjct: 119 CGKNIQHVDPELRRFIRSTGIKLEAVDSRNAASTYNILNEEGRIVAAALLPHGVSS 174


>Glyma03g24270.3 
          Length = 127

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/116 (75%), Positives = 101/116 (87%), Gaps = 10/116 (8%)

Query: 1   MSIKQR----LPNLIRTLRNEQPLKPQQNHA----LPSLRRAFSLYDQINVIDKLPDDQL 52
           M+++QR    LP L+RTLR E PLKP+ NHA    LPSLRRAFSLYDQIN+ID++P+DQL
Sbjct: 1   MAVRQRAVSALPTLLRTLRKE-PLKPR-NHAHVNALPSLRRAFSLYDQINLIDQVPEDQL 58

Query: 53  RFQGYSDTGFTVNRVEYEGSLLCVGNLLLSWKPNKFSEITADSLSLFQIVRPIPEI 108
           RFQGY+DTGFTVN VEYEGSLLCVGNLL+SWKP KFSEITADSLS+FQIVRPIP+ 
Sbjct: 59  RFQGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKKFSEITADSLSIFQIVRPIPDF 114


>Glyma03g24270.2 
          Length = 122

 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 88/102 (86%), Gaps = 10/102 (9%)

Query: 1   MSIKQR----LPNLIRTLRNEQPLKPQQNHA----LPSLRRAFSLYDQINVIDKLPDDQL 52
           M+++QR    LP L+RTLR E PLKP+ NHA    LPSLRRAFSLYDQIN+ID++P+DQL
Sbjct: 1   MAVRQRAVSALPTLLRTLRKE-PLKPR-NHAHVNALPSLRRAFSLYDQINLIDQVPEDQL 58

Query: 53  RFQGYSDTGFTVNRVEYEGSLLCVGNLLLSWKPNKFSEITAD 94
           RFQGY+DTGFTVN VEYEGSLLCVGNLL+SWKP KFSEITAD
Sbjct: 59  RFQGYNDTGFTVNGVEYEGSLLCVGNLLMSWKPKKFSEITAD 100