Miyakogusa Predicted Gene

Lj3g3v1543500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1543500.1 tr|A9SV53|A9SV53_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,39.29,0.00000002,coiled-coil,NULL; seg,NULL,CUFF.42787.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g34230.1                                                       120   3e-28
Glyma13g36320.1                                                       118   1e-27

>Glyma12g34230.1 
          Length = 212

 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/87 (74%), Positives = 67/87 (77%)

Query: 1   MGKEFGSAELLAKVGXXXXXXXXXXXXXXXXXGKVEERMVTELFRVLKLMEMDLAMVKAA 60
           MGKEFGS ELLAKVG                 GKVEERMVTELFRVLKLMEMDLAMVKAA
Sbjct: 126 MGKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFRVLKLMEMDLAMVKAA 185

Query: 61  VKDETLGERLQQAKARGRQAILVAYSF 87
           VK+ETLGERL+ AKAR RQAILVAYSF
Sbjct: 186 VKEETLGERLELAKARCRQAILVAYSF 212


>Glyma13g36320.1 
          Length = 213

 Score =  118 bits (295), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/87 (73%), Positives = 66/87 (75%)

Query: 1   MGKEFGSAELLAKVGXXXXXXXXXXXXXXXXXGKVEERMVTELFRVLKLMEMDLAMVKAA 60
           M KEFGS ELLAKVG                 GKVEERMVTELFRVLKLMEMDLAMVKAA
Sbjct: 127 MEKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFRVLKLMEMDLAMVKAA 186

Query: 61  VKDETLGERLQQAKARGRQAILVAYSF 87
           VK+ETLGERL+ AKAR RQAILVAYSF
Sbjct: 187 VKEETLGERLELAKARCRQAILVAYSF 213