Miyakogusa Predicted Gene

Lj3g3v1507280.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1507280.2 Non Chatacterized Hit- tr|I3SL79|I3SL79_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,89.34,0,Ribosomal protein L1,Ribosomal protein L1, superfamily;
Ribosomal_L1,Ribosomal protein L1; seg,NULL;,CUFF.42713.2
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g15450.1                                                       429   e-120
Glyma06g42860.1                                                       426   e-119
Glyma09g36120.1                                                       133   2e-31
Glyma12g01210.1                                                       132   3e-31

>Glyma12g15450.1 
          Length = 408

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/273 (79%), Positives = 238/273 (87%)

Query: 1   MEMERRRIEAEDQLRARMVRAVEDEKMKVPFPLLIRPKQKEKPPVLDLMEAIRQVKANAK 60
           +E ERR IEAE+++R RM +A EDE+MKVPFPLLI+PK+ EKPP LDL EAIRQVK NAK
Sbjct: 135 VESERRMIEAENEMRMRMAKAAEDERMKVPFPLLIKPKKNEKPPPLDLNEAIRQVKTNAK 194

Query: 61  AKFDETIEAHIRLGIESKRTELAVRGTVILPHGAPKXXXXXXXXXXXXXXXXXXXXXDIV 120
           AKFDET+EAHIRLG++SKRTE+AVRGTVILPHGAPK                     DIV
Sbjct: 195 AKFDETVEAHIRLGVDSKRTEMAVRGTVILPHGAPKAVSVAVFAEGAEAEEAKAAGADIV 254

Query: 121 GGKELIEEIASGNNKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTNDISGQL 180
           GGKELIEEIASG NKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLT+DI+GQL
Sbjct: 255 GGKELIEEIASGKNKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIAGQL 314

Query: 181 KELRQGRLEFKMESKSILHAGVGKVSYKDESLRENIGAFMNAVLLAKPAGLKKTSKYAGY 240
           KELRQGR+EFKMESKSILH G+GKVSYK+E+LRENI AFMNAVLLAKPAGLKKTSKYAGY
Sbjct: 315 KELRQGRVEFKMESKSILHVGLGKVSYKEEALRENISAFMNAVLLAKPAGLKKTSKYAGY 374

Query: 241 VLSVHICSTMGPGFPVSIQSLSKAADNYKKMHV 273
           VLSVH+ STMGPG PVSIQS+SKAADNYKKMHV
Sbjct: 375 VLSVHVSSTMGPGLPVSIQSISKAADNYKKMHV 407


>Glyma06g42860.1 
          Length = 399

 Score =  426 bits (1096), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/272 (80%), Positives = 239/272 (87%)

Query: 2   EMERRRIEAEDQLRARMVRAVEDEKMKVPFPLLIRPKQKEKPPVLDLMEAIRQVKANAKA 61
           E ERR IEAE+++R RM +AVE+E+MKVPFPLLI+PK+ EKPP LDL EAIRQVKANAKA
Sbjct: 127 ESERRMIEAENEMRLRMAKAVEEERMKVPFPLLIKPKKNEKPPPLDLNEAIRQVKANAKA 186

Query: 62  KFDETIEAHIRLGIESKRTELAVRGTVILPHGAPKXXXXXXXXXXXXXXXXXXXXXDIVG 121
           KFDET+EAHIRLG++SKRTE+AVRGTVILPHGAPK                     DIVG
Sbjct: 187 KFDETVEAHIRLGVDSKRTEMAVRGTVILPHGAPKAVSVAVFAEGAEAEEAKAAGADIVG 246

Query: 122 GKELIEEIASGNNKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTNDISGQLK 181
           GKELIEEIASG NKLKVDKCFSTPGMAP+LGKIAQYLRKRRLMPDKKLGTLT+DI+GQLK
Sbjct: 247 GKELIEEIASGKNKLKVDKCFSTPGMAPNLGKIAQYLRKRRLMPDKKLGTLTSDIAGQLK 306

Query: 182 ELRQGRLEFKMESKSILHAGVGKVSYKDESLRENIGAFMNAVLLAKPAGLKKTSKYAGYV 241
           ELRQGR+EFKMESKSILH G+GKVSYK+E+LRENI AFMNAVLLAKPAGLKKTSKYAGYV
Sbjct: 307 ELRQGRVEFKMESKSILHVGLGKVSYKEEALRENISAFMNAVLLAKPAGLKKTSKYAGYV 366

Query: 242 LSVHICSTMGPGFPVSIQSLSKAADNYKKMHV 273
           LSVHI STMGPG PVSIQS+SKAADNYKKMH+
Sbjct: 367 LSVHISSTMGPGLPVSIQSISKAADNYKKMHM 398


>Glyma09g36120.1 
          Length = 345

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 11/227 (4%)

Query: 35  IRPKQKEKPPVLDLMEAIRQVKANAKAKFDETIEAHIRLGIESKRTELAVRGTVILPHGA 94
           +R ++KE     DL  AI  VK  AK KF ET+EAH RL I+ K  +  +R TV LP G 
Sbjct: 122 LRERKKE----YDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGT 177

Query: 95  PKXXXXXXXXXXXXXXXXXXXXXDIVGGKELIEEIASGNNKLKVDKCFSTPGMAPHLGKI 154
            K                     D+VGG++LIE+I +G   ++ DK  ++P M P +  +
Sbjct: 178 GKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGF--MEFDKLIASPDMMPKVASL 235

Query: 155 AQYLRKRRLMPDKKLGTLTNDISGQLKELRQGRLEFKMESKSILHAGVGKVSYKDESLRE 214
            + L  R LMP+ K GT+T +I   + E +QG++E++ +   I+H   GK  + +E L  
Sbjct: 236 GKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLV 295

Query: 215 NIGAFMNAVLLAKPAGLKKTSKYAGYVLSVHICSTMGPGFPVSIQSL 261
           N+ A + +V   KP+G K       Y  S HICS MGP   ++I+ +
Sbjct: 296 NLLAAVKSVEANKPSGAKGV-----YWKSAHICSAMGPSIRLNIREM 337


>Glyma12g01210.1 
          Length = 340

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 120/227 (52%), Gaps = 11/227 (4%)

Query: 35  IRPKQKEKPPVLDLMEAIRQVKANAKAKFDETIEAHIRLGIESKRTELAVRGTVILPHGA 94
           +R ++KE     DL  AI  VK  AK KF ET+EAH RL I+ K  +  +R TV LP G 
Sbjct: 117 LRERKKE----YDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGT 172

Query: 95  PKXXXXXXXXXXXXXXXXXXXXXDIVGGKELIEEIASGNNKLKVDKCFSTPGMAPHLGKI 154
            K                     D+VGG++LIE+I +G   ++ DK  ++P M P +  +
Sbjct: 173 GKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGF--MEFDKLIASPDMMPKVASL 230

Query: 155 AQYLRKRRLMPDKKLGTLTNDISGQLKELRQGRLEFKMESKSILHAGVGKVSYKDESLRE 214
            + L  R LMP+ K GT+T +I   + E +QG++E++ +   I+H   GK  + +E L  
Sbjct: 231 GKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLV 290

Query: 215 NIGAFMNAVLLAKPAGLKKTSKYAGYVLSVHICSTMGPGFPVSIQSL 261
           N+ A + +V   KP+G K       Y  S HICS MGP   ++I+ +
Sbjct: 291 NLLAAVKSVEANKPSGAKGV-----YWKSAHICSAMGPSIRLNIREM 332