Miyakogusa Predicted Gene
- Lj3g3v1403900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1403900.1 Non Chatacterized Hit- tr|A5BG18|A5BG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.27,4.00001e-40,Ribonuclease H-like,Ribonuclease H-like domain;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; DUF,CUFF.42534.1
(158 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g21390.1 102 2e-22
Glyma08g16350.1 99 2e-21
Glyma19g06720.1 64 6e-11
Glyma13g22850.1 62 2e-10
Glyma01g42060.1 59 3e-09
Glyma09g09280.2 57 9e-09
Glyma01g33090.1 52 3e-07
Glyma04g34400.1 50 1e-06
Glyma05g22550.1 50 1e-06
>Glyma15g21390.1
Length = 1523
Score = 102 bits (253), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 2/159 (1%)
Query: 1 MNFLVYSSKGTVFLNSIDVSDAATRDTDFYFQLLDKIXXXXXXXXXXXXXTDNEAALKAV 60
+NFLV G F++S+D ++ D F+LLDKI T+N KA
Sbjct: 394 INFLVSCPHGVYFVSSVDATNV-VEDAPNLFKLLDKIVEEVGEENVVQVITENTPNYKAA 452
Query: 61 GHKLMDKRPHLYWFACAAHCLDLCLEDIGKKKNVQAVLNDAKTVTNFIYNHIWTVSLMK- 119
G L +KR +L+W A +C++ LED K + V+ + + +T IYN IW ++LMK
Sbjct: 453 GKMLEEKRRNLFWTPSATYCINCMLEDFMKIRCVEECMEKGQKITKLIYNQIWLLNLMKS 512
Query: 120 QFTNGREIVRPGITRFATQCLQLQAILKQKDGLIKMFDS 158
+FT G+E+++P T+FA+ L ++L + L +MF S
Sbjct: 513 EFTRGQELLKPAATQFASSFATLLSLLDHRVALRRMFLS 551
>Glyma08g16350.1
Length = 528
Score = 98.6 bits (244), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 1 MNFLVYSSKGTVFLNSIDVSDAATRDTDFYFQLLDKIXXXXXXXXXXXXXTDNEAALKAV 60
+NFLV + GT+F SID S+ + + F+LLD I T N +
Sbjct: 228 INFLVNCTAGTMFYKSIDPSNF-VKSGEKTFELLDSIVEEIGEEKVVQVITGNGSNYVLA 286
Query: 61 GHKLMDKRPHLYWFACAAHCLDLCLEDIGKKKNVQAVLNDAKTVTNFIYNHIWTVSLMKQ 120
G L KR HLYW CAAHC+DL LEDIGK ++ + A ++ FIY+H T+SL++
Sbjct: 287 GKFLERKRSHLYWIPCAAHCIDLMLEDIGKLPLIKKTILRAISLVGFIYSHSSTLSLLRF 346
Query: 121 FTNGREIVRPG--ITRFATQCLQLQAILKQKDGLIKMFD 157
FTN RE+VR + + +A+ K K+ + K F+
Sbjct: 347 FTNKRELVRHALLVRKKPAMGYIYEAMEKAKEAIRKSFE 385
>Glyma19g06720.1
Length = 3023
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 1 MNFLVYSSKGTVFLNSIDVSDAATRDTDFYFQLLDKIXXXXXXXXXXXXXTDNEAALKAV 60
+NF+V + G +FL +ID S+ +D DF + + ++ DN A KA
Sbjct: 2553 INFMVVTESGPMFLKAIDCSNE-IKDKDFIAKHMREVIMEVGHSNVVQIVIDNAAVCKAA 2611
Query: 61 GHKLMDKRPHLYWFACAAHCLDLCLEDIGKKKNVQ-------------AVLNDAKTVTNF 107
G + + P +YW C H L+L L++I KN + + +DA V F
Sbjct: 2612 GLIIEAEFPSIYWTPCVVHTLNLALKNICAAKNTEKNNVAYEECSWITQIADDAMFVKIF 2671
Query: 108 IYNHIWTVSLMKQFTNGREIVRPGITRFATQCLQLQAILKQKDGLIKM 155
I +H +S+ N +++ TRFA+ + L+ + K GL +M
Sbjct: 2672 IMSHSMRLSIF----NSLKLLSIAPTRFASTIVMLKRFKQLKKGLQEM 2715
>Glyma13g22850.1
Length = 329
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 87 DIGKKKNVQAVLNDAKTVTNFIYNHIWTVSLMKQFTNGREIVRPGITRFATQCLQLQAIL 146
DIGK + V V + A +T +IYNH + + M+++T+GREI P +T AT + LQ+IL
Sbjct: 202 DIGKLEEVSEVGSHASKITKYIYNHCYALFFMRKYTSGREIFCPTLTCVATNFIALQSIL 261
Query: 147 KQKDGLIKM 155
QKD L M
Sbjct: 262 AQKDALRAM 270
>Glyma01g42060.1
Length = 151
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 107 FIYNHIWTVSLMKQFTNGREIVRPGITRFATQCLQLQAILKQKDGLIKMF 156
+ Y+H W +++M++FT G+E++RP I+RF T L L++I+ Q+D L MF
Sbjct: 2 YTYSHAWILNIMRKFTRGKELIRPKISRFLTNFLSLRSIVMQEDNLKHMF 51
>Glyma09g09280.2
Length = 750
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 104 VTNFIYNHIWTVSLMK-QFTNGREIVRPGITRFATQCLQLQAILKQKDGLIKMF 156
+T IYN IW ++LMK +FT G+E+++P TRFA+ LQ++L + GL +MF
Sbjct: 347 ITKLIYNQIWLLNLMKSEFTEGQELLKPSATRFASSFATLQSLLDHRVGLRRMF 400
>Glyma01g33090.1
Length = 465
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 1 MNFLVYSSKGTVFLNSIDVSDAATRDTDFYFQLLDKIXXXXXXXXXXXXXTDNEAALKAV 60
+NF+ + G +FL +ID S+ +D DF + + ++ TDN KA
Sbjct: 351 INFMAVTESGPMFLKTIDCSNE-IKDKDFIAKHMREVIMEVGHSNVVQIVTDNATVCKAA 409
Query: 61 GHKLMDKRPHLYWFACAAHCLDLCLEDIGKKKNVQAVL 98
+ + P +YW C H L+L L++I KN + +
Sbjct: 410 SLIIEAEFPSIYWTPCVVHTLNLSLKNICAAKNTKKTI 447
>Glyma04g34400.1
Length = 140
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 118 MKQFTNGREIVRPGITRFATQCLQLQAILKQKDGLIKMFDS 158
M+++T+GR+I+RP TRFAT + LQ+IL QKD L M S
Sbjct: 1 MRKYTSGRDIIRPASTRFATNFIALQSILAQKDALRVMVTS 41
>Glyma05g22550.1
Length = 232
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 105 TNFIYNHIWTVSLMKQFTNGREIVRPGITRFATQCLQLQAILKQ 148
T FIY H W ++L ++ + GRE+ RP ITRFA L LQ +L+Q
Sbjct: 1 TTFIYWHPWVLNLYRKHSKGRELARPVITRFAIVFLTLQCLLQQ 44