Miyakogusa Predicted Gene

Lj3g3v0630330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0630330.1 Non Chatacterized Hit- tr|B7FHB1|B7FHB1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,66.15,0.0000000000001, ,79404_g.1
         (56 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g24270.1                                                        76   7e-15
Glyma03g24270.2                                                        76   8e-15
Glyma03g24270.3                                                        76   9e-15

>Glyma03g24270.1 
          Length = 174

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 10/64 (15%)

Query: 1  MSIKQR----LPNLIRTLRNEQPLKPQQNHA----LPSLRRAFSLYDQINVIDKLPDDQL 52
          M+++QR    LP L+RTLR E PLKP+ NHA    LPSLRRAFSLYDQIN+ID++P+DQL
Sbjct: 1  MAVRQRAVSALPTLLRTLRKE-PLKPR-NHAHVNALPSLRRAFSLYDQINLIDQVPEDQL 58

Query: 53 RFQG 56
          RFQG
Sbjct: 59 RFQG 62


>Glyma03g24270.2 
          Length = 122

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 10/64 (15%)

Query: 1  MSIKQR----LPNLIRTLRNEQPLKPQQNHA----LPSLRRAFSLYDQINVIDKLPDDQL 52
          M+++QR    LP L+RTLR E PLKP+ NHA    LPSLRRAFSLYDQIN+ID++P+DQL
Sbjct: 1  MAVRQRAVSALPTLLRTLRKE-PLKPR-NHAHVNALPSLRRAFSLYDQINLIDQVPEDQL 58

Query: 53 RFQG 56
          RFQG
Sbjct: 59 RFQG 62


>Glyma03g24270.3 
          Length = 127

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 10/64 (15%)

Query: 1  MSIKQR----LPNLIRTLRNEQPLKPQQNHA----LPSLRRAFSLYDQINVIDKLPDDQL 52
          M+++QR    LP L+RTLR E PLKP+ NHA    LPSLRRAFSLYDQIN+ID++P+DQL
Sbjct: 1  MAVRQRAVSALPTLLRTLRKE-PLKPR-NHAHVNALPSLRRAFSLYDQINLIDQVPEDQL 58

Query: 53 RFQG 56
          RFQG
Sbjct: 59 RFQG 62