Miyakogusa Predicted Gene

Lj3g3v0592200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0592200.1 Non Chatacterized Hit- tr|I1LXN6|I1LXN6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.48,0,trpS:
tryptophan--tRNA ligase,Tryptophan-tRNA ligase; seg,NULL; no
description,Rossmann-like alpha/b,CUFF.41015.1
         (311 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11390.1                                                       514   e-146
Glyma03g25740.1                                                       513   e-145

>Glyma13g11390.1 
          Length = 404

 Score =  514 bits (1325), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/294 (84%), Positives = 261/294 (88%)

Query: 17  IPFMFTKYLQDTFKVPLVIQLTDDEKFLWKNLTIEESQRLARENAKDIIACGFDISKTFI 76
           IPFMFTKYLQD FKVPLVIQLTDDEKF WKNLTIEE +RLARENAKDIIACGFDISKTFI
Sbjct: 110 IPFMFTKYLQDVFKVPLVIQLTDDEKFFWKNLTIEECRRLARENAKDIIACGFDISKTFI 169

Query: 77  FSDFSYVGSAFYKNMMEIAKRVTYNQAVGIFGFTGEDHIGKVXXXXXXXXXXXXXXXXXX 136
           FSDF+YVG +FYKNM E+ KRVTYNQAVGIFGF GEDHIGKV                  
Sbjct: 170 FSDFNYVGGSFYKNMCEVGKRVTYNQAVGIFGFAGEDHIGKVSFPPVQAVPSFPSSFPHL 229

Query: 137 XXGKEKLRCLIPCAIDQDPYFRMTRDVAPKLQYNKPALIESTFFPALQGETGKMSASDPN 196
             GKE LRCLIPCAIDQDPYFRMTRDVAPK+ ++KPALIES FFPALQGETGKMSASDPN
Sbjct: 230 FSGKENLRCLIPCAIDQDPYFRMTRDVAPKMGFHKPALIESLFFPALQGETGKMSASDPN 289

Query: 197 SAIYVTDSAKDIKNKVNKYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDDELEHI 256
           SAIYVTDSAKDIKNKVNK+AFSGGQDSIEKHRQLGANLEVDIP+KYL+FFLEDDDELEHI
Sbjct: 290 SAIYVTDSAKDIKNKVNKHAFSGGQDSIEKHRQLGANLEVDIPVKYLTFFLEDDDELEHI 349

Query: 257 KKEYGAGRMLTGEVKQRLVEVLTALVERHCRARAAVTEEMVDAFMAVRPLPHMF 310
           KKEYG GRMLTGEVKQRLV+VLT LVERH RARA+VTEEMVDAFMA+RPLPHMF
Sbjct: 350 KKEYGEGRMLTGEVKQRLVQVLTELVERHRRARASVTEEMVDAFMAIRPLPHMF 403


>Glyma03g25740.1 
          Length = 404

 Score =  513 bits (1320), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/295 (83%), Positives = 262/295 (88%)

Query: 17  IPFMFTKYLQDTFKVPLVIQLTDDEKFLWKNLTIEESQRLARENAKDIIACGFDISKTFI 76
           IPFMFTKYLQD FKVPLVIQLTDDEKF WKNL+I+E +RLARENAKDIIACGFDISKTFI
Sbjct: 110 IPFMFTKYLQDVFKVPLVIQLTDDEKFFWKNLSIDECRRLARENAKDIIACGFDISKTFI 169

Query: 77  FSDFSYVGSAFYKNMMEIAKRVTYNQAVGIFGFTGEDHIGKVXXXXXXXXXXXXXXXXXX 136
           FSDF+YVG +FYKNM E+ KRVTYNQAVGIFGF GEDHIGKV                  
Sbjct: 170 FSDFNYVGGSFYKNMCEVGKRVTYNQAVGIFGFVGEDHIGKVSFPPVQAVPSFPSSFPHL 229

Query: 137 XXGKEKLRCLIPCAIDQDPYFRMTRDVAPKLQYNKPALIESTFFPALQGETGKMSASDPN 196
             GKE LRCLIPCAIDQDPYFRMTRDVAPK+ ++KPALIES FFPALQGETGKMSASDPN
Sbjct: 230 FSGKENLRCLIPCAIDQDPYFRMTRDVAPKMGFHKPALIESLFFPALQGETGKMSASDPN 289

Query: 197 SAIYVTDSAKDIKNKVNKYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDDELEHI 256
           SAIYVTDSAKDIKNKVNK+AFSGGQDSIEKHRQLGANLEVDIP+KYL+FFLEDDDELEHI
Sbjct: 290 SAIYVTDSAKDIKNKVNKHAFSGGQDSIEKHRQLGANLEVDIPVKYLTFFLEDDDELEHI 349

Query: 257 KKEYGAGRMLTGEVKQRLVEVLTALVERHCRARAAVTEEMVDAFMAVRPLPHMFD 311
           KKEYG GRMLTGEVKQRL++VLT LVERH RARA+VTEEMVDAFMA+RPLPHMFD
Sbjct: 350 KKEYGEGRMLTGEVKQRLIQVLTELVERHRRARASVTEEMVDAFMAIRPLPHMFD 404