Miyakogusa Predicted Gene

Lj3g3v0478180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0478180.1 Non Chatacterized Hit- tr|D8RPH8|D8RPH8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.67,0.000000000003,seg,NULL,
NODE_46239_length_995_cov_86.626129.path1.1
         (192 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27400.1                                                       184   5e-47

>Glyma13g27400.1 
          Length = 232

 Score =  184 bits (467), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 99/126 (78%)

Query: 46  PHFKHQEIEGPTVERDLSPLANETREVLETTMKNVYGLSRXXXXXXXXXXXXXXWITYVT 105
           P+FKHQEIEGPTVERDLSPLANETR VLET MKN+Y LSR              WITY+T
Sbjct: 84  PNFKHQEIEGPTVERDLSPLANETRVVLETMMKNMYSLSRVVAALGLLQLTLGAWITYLT 143

Query: 106 RSSPITEVSVQSFVAFALPFSLAFMLRQCLKPMHFLKKMEEQGRLQILTLTMQVAKQLNA 165
           +S PI EVS+QS +AFA PFSLAFMLR+ LKPMHF KKMEE GRLQILTL +QVAKQLN 
Sbjct: 144 KSEPIAEVSLQSLLAFAFPFSLAFMLRRALKPMHFFKKMEELGRLQILTLALQVAKQLNV 203

Query: 166 FFVRVR 171
            FVRVR
Sbjct: 204 LFVRVR 209